Polaribacter batillariae: JL193_01440
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Entry
JL193_01440 CDS
T08207
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pbat
Polaribacter batillariae
Pathway
pbat00730
Thiamine metabolism
pbat01100
Metabolic pathways
pbat01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JL193_01440 (thiC)
Enzymes [BR:
pbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JL193_01440 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QTD37997
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All DBs
Position
complement(318476..320335)
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AA seq
619 aa
AA seq
DB search
MKKKDTAPKKDGITRYPFPNSKKIYVSGKIHPQIKVAMREISLTDSIDSFTKKKTPNEPV
TVYDTSGPYTDPNKDIDIHKGIERIREQWILDRKNVEKLDQFSSKYSNERLNDKSLDHMR
FSLLKKPLRAKKGENVTQLHYAKKGIITPEMEYIAIRENQRIDELTEIRKQHKGKHFGAS
IPNKITPEFVRSEVAKGRAVIPSNINHPEAEPMILGRNFLVKINANIGNSAVTSSIEEEV
EKAVWACRWGADNIMDLSTGENIHETREWIIRNSPVPVGTVPIYQALEKVNGVAEDLTWE
IFRDTLIEQAEQGVDYFTIHAGVLLRYIPMTANRVTGIVSRGGSIMAKWCLAHHKESFLY
THFEDICEILKQYDVAFSLGDGLRPGSIADANDEAQFAELETLGELTKIARKHEVQCFIE
GPGHVPMHMIKENMDKQIEACDEAPFYTLGPLTTDIAPGYDHITSGIGAAIIGWYGCAML
CYVTPKEHLGLPNKEDVRVGVITYKIAAHAADLAKGHPGAQHRDNALSMARFEFRWRDQF
NLGLDPERALEYHDETLPAEGAKVAHFCSMCGPKFCSMKISQEVRDFAAENNIIDNEVIA
KGMEEKSKEFKEKGSEVYL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaagatacagcacccaaaaaagacggaattacaagatatccatttccaaac
tcaaaaaagatttatgtttctggtaaaattcatccacaaataaaagtggcaatgcgcgaa
atttctttaacagattcaatagattcttttactaaaaagaaaaccccaaacgaacctgtt
accgtttacgatacttctggcccttatacagaccctaacaaagatatcgacattcataaa
ggaatagaacgtattcgcgagcaatggattttagacagaaaaaatgtagaaaaactagac
caattctcctctaaatatagcaacgagcgtttaaacgataaaagtttagaccatatgcgt
ttttctttattaaaaaagcctttgcgagcaaaaaaaggagaaaatgtaacccaattgcat
tatgctaaaaaaggcattattaccccagaaatggagtacattgctattcgtgaaaaccag
cgaatagacgaattaacagaaattagaaaacagcacaaaggaaaacactttggcgcttcg
attccaaataaaattaccccagagtttgtacgttcggaggttgcaaaaggtcgtgctgta
attccttcaaacatcaatcatccagaagcagagcctatgattttaggtagaaattttttg
gtaaaaataaatgcaaatattggcaattctgcagtaacatcttcaattgaagaagaagta
gaaaaagccgtttgggcttgtagatggggtgcagacaatattatggatttatctacagga
gaaaacattcacgaaacccgtgagtggattattagaaactctccagtgccagttggtaca
gtacccatttatcaagccttagaaaaagtaaacggagtagcagaagatttaacttgggaa
atttttcgagataccttaatcgaacaagcagaacaaggtgtcgattattttacaattcat
gcaggagttttattgcgctacattccaatgacagcaaatcgtgtaacaggtattgtgtcg
cgtggtggctcaattatggcaaaatggtgtttggcacatcataaagaaagttttttatac
acacatttcgaagatatttgcgaaatattaaaacaatacgatgttgctttttcattagga
gatggtttgcgtccaggttctatagcagatgccaatgacgaagctcagtttgcagaacta
gaaactttgggagaattaactaaaattgctcgtaagcacgaagtacaatgttttatagaa
ggtccaggtcacgtgccaatgcatatgataaaagaaaatatggataagcaaatagaagct
tgtgacgaagcaccattttacactttaggacctttaacaacagatattgcaccaggttac
gaccatataacttctggtattggtgcagctataattggttggtatggctgtgctatgttg
tgttacgtaacacctaaagaacatttaggattgcctaataaagaagatgttcgagttgga
gtaattacctataaaatagcggcacacgctgcagatttggcaaaaggccatccaggtgca
cagcatagagataatgcattaagcatggctcgttttgaatttcgttggcgagaccaattc
aacttagggctagatccagagcgtgctttagaatatcacgatgaaaccttgccagcagaa
ggtgctaaagtagcacatttttgttctatgtgcggtccaaaattttgttcgatgaaaata
tctcaagaagtacgagattttgcagcagaaaataacattatcgataatgaagtaattgca
aaaggaatggaagaaaaatcgaaagaatttaaagaaaaaggttcagaagtttatttataa
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