Polaribacter batillariae: JL193_04410
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Entry
JL193_04410 CDS
T08207
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbat
Polaribacter batillariae
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbat03400
]
JL193_04410
Enzymes [BR:
pbat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JL193_04410
DNA repair and recombination proteins [BR:
pbat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JL193_04410
Prokaryotic type
JL193_04410
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QTD38537
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Position
1001388..1002692
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AA seq
434 aa
AA seq
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MKNKINIFWFRRDLRLDDNIGFYNALKSDFPVLPIFIFDENILDKLPKNDARVTFIFDEL
QKMRKTLQDENDSSLAIYYGTPKNIYKKLIKNYKVDTVFTNRDYEPYATKRDEEIEKLLA
NNNINFKTFKDQVIFEKDEVVKKDGEPYVVYTPYMKVWKEQFKTYNLDIYYTNSFLKNLV
KNTRLPNVSLADLGCTKSKQKIKDYDVTPTLIQNYEDTRNFPAKDATSKLGPHLRFGTVS
IRKIIKKATAEKNEIFWQELIWREFFMQILWHFPHTHKKAFKAKYDRIEWRNNEDEFKKW
CEGQTGYPLVDAGMRQLNKTGFMHNRVRMLVGSFLCKHLLIDWRWGEAYFAEKLHDYEMA
SNVGNWQWVAGSGVDASPYFRIFNPTTQIKKFDKDLAYIKKWVPEFQELGYAKEMVNHKE
ARERCLKTYKEALK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaaataaacattttttggtttcgaagagatttaagattagatgataatatc
ggtttttacaacgctttaaaaagtgatttccctgtacttcctatttttatttttgatgaa
aatattttagacaaattgccaaaaaacgatgccagagttacttttatttttgatgaattg
caaaaaatgagaaaaacattacaagacgaaaacgacagtagtttggctatttattatgga
acaccaaaaaatatttataaaaaattaataaaaaattacaaagtagataccgtttttaca
aaccgagattacgaaccttatgcaacaaaaagagacgaagaaatagaaaaattattagcc
aataataacattaattttaagacttttaaagatcaggtaattttcgaaaaagacgaagtt
gtaaaaaaagatggcgaaccatacgtagtttacacaccttatatgaaagtgtggaaagag
cagtttaaaacctataatttagatatttactataccaattctttcttaaaaaacttggta
aaaaacacacgtttacccaatgtttcgctagctgatttaggttgtaccaaatccaaacaa
aaaattaaagattacgatgttacacctactttaattcaaaactacgaagacacacgtaat
tttccagcaaaagatgccacctcaaaattaggacctcatttacgatttggaacagtgagt
attcgaaaaataattaaaaaagctactgcagaaaaaaatgagattttttggcaagaatta
atttggcgagaattttttatgcaaattttatggcattttcctcatactcacaaaaaagct
tttaaagctaaatacgatagaatcgaatggagaaataacgaagatgaatttaaaaaatgg
tgcgaaggacaaacaggttatcctctagtagatgcaggaatgcgtcaattaaacaaaacg
gggtttatgcacaacagagtaagaatgttggtaggtagttttttatgcaaacatttgtta
atcgattggaggtggggagaagcctactttgccgaaaaattacacgattacgaaatggct
agcaatgtgggcaattggcaatgggttgcaggttctggtgtagatgcttcgccttatttt
agaatttttaaccccacaacgcaaattaaaaagttcgataaagatttggcatacataaaa
aaatgggtgcccgaatttcaagaactagggtatgcgaaagaaatggtaaaccataaagaa
gcaagagaacgttgtttaaaaacttataaagaggcattaaaataa
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