Polaribacter batillariae: JL193_06530
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Entry
JL193_06530 CDS
T08207
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pbat
Polaribacter batillariae
Pathway
pbat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JL193_06530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbat03021
]
JL193_06530
Transcription machinery [BR:
pbat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL193_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_10
HTH_28
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QTD38905
UniProt:
A0ABX7SXD2
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All DBs
Position
1494061..1494924
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AA seq
287 aa
AA seq
DB search
MRQLKIVKQVTNRDAKSLEKYFQEISKIGLITADEEVELALKIKKGDEKALNTLVSANLR
FVVSVAKQYQGQGLKLSDLINEGNLGLVKAAKRFDETRGFKFISYAVWWIRQSIMSALAE
QSRIVRLPLNKIGSISKIKKIYARLEQDEQRMPTHKEIAKQLDMTETEVAQSLRNSRRHV
SMDAPFKEGEDANLYNVLQYDESPKPDKNLMNQSLSIEIDRALDTLSLKEAKVIKMFYGI
GNETASSLSEIGEKFDLSRERVRQVKQRALNRLKSKSKGHMLRTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattgtaaaacaagtaaccaatcgcgacgcaaaatctttagaaaaa
tattttcaagaaattagtaaaattgggttaattactgctgatgaagaagtagaattggct
ttaaaaattaaaaaaggagatgaaaaagcattaaatacacttgtgagcgcaaatttaaga
tttgttgtatctgttgcgaaacagtatcaaggacagggcttaaaattatctgacttaatt
aatgaaggcaatttaggtttggtaaaggctgcaaaacgttttgatgaaaccagaggtttt
aagtttatttcttatgctgtttggtggattcgtcaatctataatgtctgcacttgcagaa
caatctcgaattgtacgtttgccattaaataaaattggaagcattagtaaaattaaaaaa
atatatgccagattagagcaagacgaacaacgcatgccaacacataaagaaattgcgaag
caattagatatgactgaaactgaagttgcacaatctttaagaaattctagaagacatgtt
tctatggacgctccttttaaagaaggtgaagatgctaatttatacaacgtattgcagtat
gatgaatctccaaaacccgataaaaatttaatgaaccaatctttatctatagaaatagac
agagctttggatactttgtctttaaaagaagccaaggttattaaaatgttttatggaatt
ggaaatgaaactgcttctagtttatcggaaattggtgaaaaattcgatttatcgagagaa
cgtgttcgtcaggtaaaacaacgcgctttaaatcgtttaaaatcaaaatctaaaggacac
atgttaagaacatatttaggctaa
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