Polaribacter batillariae: JL193_06550
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Entry
JL193_06550 CDS
T08207
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pbat
Polaribacter batillariae
Pathway
pbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JL193_06550 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbat03400
]
JL193_06550 (ruvB)
Enzymes [BR:
pbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL193_06550 (ruvB)
DNA repair and recombination proteins [BR:
pbat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JL193_06550 (ruvB)
RecFOR pathway proteins
JL193_06550 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
nSTAND3
AAA_14
AAA_PrkA
ResIII
TIP49
AAA_16
RNA_helicase
AAA_33
NB-ARC
AAA_18
TsaE
AAA_24
NTPase_1
AAA_28
Bac_DnaA
NPHP3_N
Rad17
NACHT
ABC_tran
AAA_11
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QTD38908
LinkDB
All DBs
Position
complement(1498941..1499963)
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLNPKNDNYTNEELDVEKKLRPLSFDDFSGQDQAIDNLKIFVEAANQRGEALDHTLF
HGPPGLGKTTLAHILANELEVGIKITSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLEPFTLVGATTRSGLLTAPMRARFGINSR
LHYYSTELLTTIIQRSANILGVPISMEGAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
NITIEIAKYALKALNVDAHGLDEMDNKILMTIIDKFKGGPVGLSTIATAVSENTETIEEV
YEPFLIQQGFIMRTPRGREVTELAYKHLGRIKGRSQGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacttaaatcccaaaaacgataattacacaaatgaagaattagacgtagaa
aaaaaactacgtccgctttcgtttgatgatttctcagggcaagatcaagcaattgataat
ttaaaaattttcgtagaagcagccaatcaaagaggcgaagctttagaccacactttgttt
catggtcctccaggtttaggaaaaactaccttagcacatattttagcaaacgagttagaa
gttggtattaaaataacttctggccccgttttagacaaaccaggagatttggctggttta
ttaaccaatttagatgaacgagatgtgctttttattgatgaaatccatcgattaagccct
attgtagaagaatatttatactctgcaatggaagattataaaattgatattatgattgaa
tctggaccaaatgccagaaccgttcaaatcaatttagaaccatttaccttagttggcgcc
acaacaagatcaggattgttaacagctccaatgagagctcgttttggaataaatagccga
ttgcattattattcaacagaacttttaaccacaattattcaaagaagtgcaaatatttta
ggagttcctatttccatggaaggtgcaatcgaaattgctggaagaagtagaggaacacca
agaattgcaaacgcattattaagaagagtacgcgattttgcgcaaattaaaggtaatgga
aacattactattgaaattgcaaaatatgcattaaaagcactaaatgtagatgcccatggt
ttggatgaaatggacaataaaattttaatgaccattatcgataaatttaaaggaggccca
gtaggattaagtacaatagcaacagctgtttctgaaaacacagaaacaattgaagaagta
tatgaaccctttttaattcagcaaggatttataatgcgtacgccaagaggaagagaagtt
acagaattggcatacaaacatttaggaagaattaaaggtagaagtcaaggagaattgttt
tag
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