Polaribacter batillariae: JL193_06965
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Entry
JL193_06965 CDS
T08207
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbat
Polaribacter batillariae
Pathway
pbat03030
DNA replication
pbat03430
Mismatch repair
pbat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL193_06965 (dnaE)
03430 Mismatch repair
JL193_06965 (dnaE)
03440 Homologous recombination
JL193_06965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbat03032
]
JL193_06965 (dnaE)
03400 DNA repair and recombination proteins [BR:
pbat03400
]
JL193_06965 (dnaE)
Enzymes [BR:
pbat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL193_06965 (dnaE)
DNA replication proteins [BR:
pbat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL193_06965 (dnaE)
DNA repair and recombination proteins [BR:
pbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL193_06965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
QTD38985
LinkDB
All DBs
Position
1597766..1602103
Genome browser
AA seq
1445 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCVQIAWQLHDGMGNVLEHNDFLIKPEGYNIPY
DAERIHGISTELAEEKGIDLDEGLRLFNKALGKTKFIVGQNLQFDIHIMGCEFHRLGIEN
NLTSLPVLDTCTEKTATLCQIPGGRGGKFKLPTLTELHNYLFGVDFNEAHNATADVEATT
RCFLELIRLREFTKEELDVDENYFKNFSEANPKPIQVIGLKHINLKQESDKIRQRLEKLK
DTADTKSTSAGLAKLKDVKFAHLHNHTQFSVLQSTMQIGNIVKAAAKDNMPAIAMTDTAN
MMASFHFVSAILNHNKTTENPIKPIIGCEFNVCEDHKNKTVKDNGYQIVLLAKNKNGYHN
LAKMSSIAFVDGFYYVPRIDKEVVKKYKEDIIVLTGNLYGEVPSKILNLGEKQAEEALLW
WKEEFKDDLYIELMRHNQQDETIVNETLLKFSSAHDIKIVATNNTFYLEKKDANAHDILL
CVKDGEKQATPKGKGRGYRYGLPNEEYYFKSSDEMKALFADLPEAIINIQEIVDKIEIFT
LARDVLLPAFDIPEEFIDEKDKEDGGKRGENNFLRHLTYEGAKKRYGEITESIKERLDFE
LSVIEKTGYPGYFLIVEDFIREARNMGVAVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF
ERFLNPERISMPDIDIDFDDEGRSKVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGDDAKSKSKVEGLRAEEKQLVEELRHMSFGNDLVSE
TINKATILEGSVRNTGIHACGVIITPGDITDYVPVALAKDSDMYVTQFDNSVVESAGLLK
MDFLGLKTLTLIKDTVKIVKAKHGIELDPETFPLDDKKTYELFQRGETVGIFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLANFTKGEADVLRKAMGKKQIAVLDKMKPKFVEQAAANGHDPKKLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMKDIKAVSFFMEEC
KRMGLQVLGPDLNESYLKFSVNKEGAVRFGMAAVKGVGAAAVRAIIKEREENGNYTSIFD
LAKRVDLRAANKKSFDSLVKAGAFDSFTNTHRAQYFAKDEKGITFLERAMKFGSKFQENA
NSAQVSMFGETSTVQFPEPEIPQCESWGTMELLSQEKEVIGIYISAHPLDDFKNEMKFCN
AALKYFKEDLAKYVNMNLAFAAIVTDVQHRVSKAGKGWAMFTMEDYGDSHEFRIFGEDYL
RMKHFLVPNSFLFVRCTIQPGWTNKEGVTGEPRLKFTEMKLLHDIMDELCKKVTIQLPIE
EINANTILNLESILKNSPGKQSLNFTVWDEKEKLEVSLPSRNTKIHITNELLATLETQQI
QFKLN
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaaccacgggtttacctaaaagttggaatgccccaata
acagatacagacaactggccaaggtgtgtgcaaattgcgtggcaattgcacgatggtatg
ggaaatgtattagaacataacgattttttaataaagccagaaggctataacattccttac
gatgcagagagaattcatggaatttctacagaattagcagaagaaaaaggaatcgattta
gacgaaggtttgcgattatttaataaagctctaggaaaaacaaaatttattgttgggcag
aacttacaatttgatattcatattatgggatgcgaattccatagattaggtatcgaaaac
aaccttacttctcttcctgttttagatacatgtacagaaaaaacagcaacactgtgtcaa
attcctggtggtcgtggaggaaaatttaaattgcctactttaacagaattgcataattat
ttatttggcgtcgattttaacgaagcacacaatgcaactgcagatgttgaagcaacaaca
cgttgttttttagaattgattcgtttacgagaatttaccaaagaagagttagatgtagat
gaaaattattttaaaaacttttcggaagcaaatccaaaaccaattcaggttattggctta
aaacacatcaacctaaaacaagaaagcgataaaattcgccaacgtctcgaaaaattaaaa
gacactgcagatacaaaatcgacttctgctggtttggccaaattaaaagatgtaaaattt
gcacatttacacaatcacacacagttttctgttttacaatctaccatgcaaataggcaac
attgtaaaagccgctgccaaagacaatatgccagccattgcaatgacagatactgcaaat
atgatggcctcttttcactttgtaagcgctattttaaatcataataaaactacagaaaac
ccaataaaaccaattattgggtgtgaatttaacgtttgcgaagaccataaaaacaaaaca
gttaaagacaatggttaccagattgttttgttagcaaaaaataaaaacggctatcataat
ttagcaaaaatgtcttccatcgcttttgtagatggtttttattacgttccaagaatcgac
aaagaagttgtaaaaaaatacaaagaagatattattgttttaacaggaaatttatatggt
gaagtacctagtaaaattctaaatctcggagaaaaacaagcagaagaagcattgctttgg
tggaaagaggaatttaaagacgatttatacatcgagttgatgcgccataaccaacaagat
gaaaccattgtaaacgaaactttgttaaagttttctagcgcccacgatattaaaattgtt
gccacaaacaacaccttttatttagaaaaaaaagatgcaaatgcccacgatattttactc
tgtgtaaaagatggcgaaaaacaagcaacacctaaaggaaaaggtcgcgggtatagatat
ggtttgccaaatgaggagtattattttaaatcttcggatgaaatgaaagccctatttgca
gatttaccagaagcgattatcaacattcaagaaattgtagataaaatcgaaatttttaca
ctagcaagagatgttttgttaccagcttttgatattcctgaagaatttatcgacgaaaaa
gacaaagaagatggaggaaaacgtggagaaaataatttcttacgccatttaacttacgaa
ggtgcaaaaaaacgctatggagaaatcacagaatctattaaagaacgtttagattttgag
ctttctgtaattgaaaaaacaggatatccaggttattttttaattgttgaagattttata
cgcgaagccagaaacatgggggttgcagtaggcccagggcgtggttctgcagcaggttct
gtagttgcctattgtttgtggattaccaatatcgacccaattaaatacgatttacttttt
gagcgtttcttaaatccagaacgtatttcgatgccagatatcgatatcgattttgatgat
gaaggacgaagtaaagtgatggattatgtaattgataaatacggtgctaatcaagtagca
caaattataacgtatggaaccatggctgcaaaatcttccattcgagacactgccagagtt
ttagatttaccgctttttgaagccgatagaattgctaaattaattcctggaattaaacta
aaaaatatttttggtgatgatgctaaaagtaaaagtaaagtagaaggtttaagagctgaa
gaaaaacaactggttgaagaattaagacacatgtcttttggaaacgatttggtttcagaa
accattaataaagccaccattttagaaggttctgttagaaatactggaatacatgcttgt
ggtgtaattattacacctggagatattacagattacgttcctgttgctttagcaaaagat
tcagacatgtatgttacccagttcgataactctgtagtagaatctgcaggtttattaaaa
atggactttttagggctaaaaacattaactttaattaaagacactgtaaaaattgtaaaa
gcaaaacatggtatagaattagacccagaaacgtttcctttagatgataaaaaaacctat
gaattgtttcaaagaggagaaactgtaggtatttttcaatacgaatctccaggaatgcaa
aaacacatgcgttctttaaaaccaaccgtttttgcagatttaattgccatgaacgccctg
tacagacctggacctatggaatacatccctagttttatcaacagaaaacacggtacagaa
gatattgagtacgatttacctgccatggaagaatatttggcagaaacttacggaattacc
gtctatcaagagcaagtaatgttactctcgcaaaagttggcaaattttaccaaaggtgaa
gccgacgttttacgaaaagcaatgggtaaaaaacaaatagcggttttagataaaatgaaa
ccaaaatttgtagaacaagccgcagcaaatggccatgacccaaaaaaattagaaaaaatc
tggaaagattgggaagcctttgcaagttacgcttttaacaaatcgcactctacttgctat
gcatggattgcttaccaaactgcctatttaaaagcacattatcctgcagaatatatggct
tctgtactttctaataatatgaaagatattaaagccgtttctttttttatggaagagtgt
aaacgaatgggattgcaagttttaggtcccgatttaaatgaatcttacctaaaattctct
gtaaacaaagaaggtgctgttcgttttggaatggctgctgtaaaaggtgttggagctgca
gcagtaagagccattattaaagaaagagaagaaaacggaaattatacttctattttcgat
ttggcaaagcgtgtagatttgcgagccgccaataaaaaatcgtttgatagcttggtaaaa
gcaggcgctttcgattcttttacaaatacacacagagcacaatattttgcaaaagacgaa
aaaggaattaccttcttagaacgtgctatgaaatttggaagcaaatttcaagaaaatgca
aattctgcacaagtttctatgtttggtgaaacttctactgtacaatttccagaaccagaa
attccacaatgcgaaagttggggaaccatggaattattatcacaagaaaaagaagtgatt
ggaatttatatttctgcacatcctttagatgattttaaaaatgaaatgaaattttgcaac
gctgctttaaaatattttaaagaagatttggcaaaatatgtaaacatgaatttagcattt
gccgccattgttacagatgtacagcatcgagtttctaaagctggtaaaggttgggcaatg
tttacgatggaagattatggcgatagccacgaatttcgaatttttggtgaagattattta
agaatgaaacactttttagtgcccaattctttcttgtttgtgcgatgtacaattcaacca
ggttggacaaataaagaaggtgttacaggagaaccaaggttaaaatttacagaaatgaag
cttcttcatgacattatggacgagctttgtaaaaaagtaaccatacaacttcctatagaa
gaaattaatgccaataccattttaaatttagagtctattttaaaaaattcgccaggaaaa
caaagtttgaattttacagtttgggacgaaaaagagaaattagaagtaagtttgccaagt
agaaacacaaaaattcatattacaaacgagttattggcgactttagagacgcaacagata
caatttaagttgaattag
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