KEGG   Polaribacter batillariae: JL193_11535
Entry
JL193_11535       CDS       T08207                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pbat  Polaribacter batillariae
Pathway
pbat03030  DNA replication
pbat03410  Base excision repair
pbat03420  Nucleotide excision repair
pbat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JL193_11535 (polA)
   03410 Base excision repair
    JL193_11535 (polA)
   03420 Nucleotide excision repair
    JL193_11535 (polA)
   03440 Homologous recombination
    JL193_11535 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbat03032]
    JL193_11535 (polA)
   03400 DNA repair and recombination proteins [BR:pbat03400]
    JL193_11535 (polA)
Enzymes [BR:pbat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JL193_11535 (polA)
DNA replication proteins [BR:pbat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     JL193_11535 (polA)
DNA repair and recombination proteins [BR:pbat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     JL193_11535 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JL193_11535 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 RNase_H_2 HHH_2 HHH_5 HHH Polycystin_dom
Other DBs
NCBI-ProteinID: QTD36762
UniProt: A0ABX7SSB0
LinkDB
Position
2611262..2614117
AA seq 951 aa
MQDQKRVFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDKLAV
CFDKGGSTDRVEMFEAYKANRDETPEAIRLAIPYIMEILKAMHIPIMVKEGFEADDVIGT
LSKQAEKEGYQTFMVTPDKDFAQLVSDNIFMYKPRFGGGYDIWGVPEVLEKFEVTDPLQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFLAAYGSMENLLANTHELKGKMREKVEAAKELG
LLSKKLATIMLDVPVTFNAEDFELDQPDIEKVTEIFNELEFRNLLTNFLKTFATETTTNT
SGVISTEIEKSQKEKTQPKKTASNTNGQFDLFATPGSGNVSKADVASGFKTIKNTNHFYQ
HVNSSLSRKLLLQKLMQQSSVCFDTETTGLKALEVALIGIAFSYEAGKGYYVSFPEDQEE
TKAILEEFRPFFESEIEKIGHNLKYDIKVLSNYNMPVKGKLFDTMIAHYLINPDMRHNMD
VLAETYLNYQPVSITELIGKKGKNQLSMRVVPIADQTEYAVEDADITFQLKQLFTTELES
GNVTKLFNDIELPLVSVLTAMEIEGINVDVAFLKQLSVALTEDINRLEKGIYEQAGEEFN
IASPKQLGIVLFENMKLVNKPKKTKTGQYKTGEDILSYLAKDHQIIRDIQEYRQYKKLQS
TYVDALPNEINPKTGRIHTQYMQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPRDK
NYVLLAADYSQIELRIIAALSQEENMINAFKNGEDIHASTAAKVFQVPIDKVTREQRSNA
KTVNFGIIYGVSAFGLSNQTDLSRSEAKELIDTYYKTYPKLKAYMASLVDFAREKGYVET
VLKRRRYLKDINSRNAVVRSAAERNAVNAPIQGSAADIIKLAMINIHKRFEEENFKSKML
LQVHDELVFDAHKDELETIKPMIKHEMENAFKMEVPLDVEIDTGLNWLEAH
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgcaagaccaaaaaagagtatttttagttgatgcttacgcattaatttttcgcggatat
tatgcctttataaaaaacccaagaattaattctaaaggtttagatacctctgcaattatg
ggttttatgaactcgcttttagatgttataaaacgagaaagaccagacaagttagccgtt
tgttttgataaaggtggtagtacagacagggtagaaatgtttgaagcctataaagccaat
agagatgagacaccagaagcaataagattggcaataccatatattatggaaattttaaaa
gcgatgcacatacccattatggtaaaagaaggtttcgaggcagatgatgttattggaaca
ctttctaaacaagcagaaaaggaaggttaccaaacttttatggttactccagataaagat
ttcgcacaattggtgtccgataatatttttatgtataaaccacgttttggtggtggttac
gatatttggggcgtgccagaagttttagaaaaattcgaagttacagatcctttacaagtt
atcgattttttaggaatgatgggcgattcttccgacaatattcctgggttgcctggggtt
ggagaaaaaacagcgaaaaaatttttagcggcctatggttctatggaaaatttattagca
aacacacacgagctaaaaggaaaaatgagagagaaagtagaagcagccaaagaattgggc
ttgctttctaagaaactggcaaccattatgttagatgtaccagtaacttttaatgcagaa
gattttgagctagaccaaccagatatcgaaaaagtaaccgagatttttaacgaattagag
tttagaaacttgttaacgaatttcttaaaaacttttgctacagaaaccactacaaatacc
tctggtgttatttcgacagaaatagagaaatcacaaaaagagaaaactcaacctaaaaaa
acagcttctaatacgaatggtcaatttgatttatttgctacgcctggaagtggaaatgtt
tctaaagcagatgttgcatctggttttaaaacgattaaaaataccaatcatttttatcaa
catgtaaactcttctttatccagaaaattattacttcaaaaattaatgcaacaaagttcg
gtttgtttcgatacagaaaccacgggtttaaaagctttggaagtagcattaattggcatc
gctttttcttatgaagccggaaaaggatattatgtttcatttccagaagatcaagaagaa
acaaaagcgattttagaagaatttagaccctttttcgaaagtgaaatcgagaaaattggt
cataacttaaaatacgatattaaagttttgtctaattataacatgcctgtaaaaggaaaa
ttattcgacacaatgattgcgcattatttaatcaacccagatatgcgccataatatggat
gttttggcagaaacgtatttaaactatcagccagtttctattacagaattgattggcaaa
aaaggaaaaaaccaactttctatgcgagtagtgccaattgcagaccaaaccgaatacgct
gtagaagatgcagacattacttttcaactcaaacaattatttacaacagaattagaaagc
ggaaacgtaaccaaattatttaacgatatcgaattgccattagtttccgttttaacagct
atggaaatagaagggattaatgtagatgtcgctttcttaaaacaattatctgttgcgcta
acagaagatatcaatcgactagaaaaaggaatttacgaacaagcaggagaagaatttaac
attgcttcgccaaaacaattgggtattgttttgttcgaaaatatgaagttggttaacaaa
cctaaaaagacaaaaacgggccaatataaaacaggcgaagacatcttgtcttacttagcg
aaagaccatcaaattattagagatattcaagaatatcgtcaatataaaaaattacaaagt
acctatgtagatgcgttaccgaatgaaatcaacccaaaaactggaagaattcatacacaa
tatatgcaagctgtggctgcaacaggaagattgagttctaacaacccgaatttgcaaaac
attcccattcgtacagaaagagggagagaggttcgtaaagcctttattccaagagacaaa
aattatgtattgttagcagccgattattctcaaatcgaattgcgaattattgcagctcta
agtcaagaagaaaatatgataaatgcgtttaaaaacggcgaagatattcacgcttcaact
gctgcaaaagtgtttcaagttcctatagataaagtaactcgtgaacaaagaagcaatgca
aaaaccgtaaattttggtattatttatggtgtttctgcttttggtttaagtaatcaaaca
gatttatcgagaagcgaagcaaaagaactcatagatacgtattataaaacctacccaaaa
ctaaaagcgtacatggcatctttggtcgattttgcgcgtgaaaaaggttacgtagaaacg
gttttaaaaagacgtagatatttaaaagacattaattctagaaacgctgttgttagaagt
gccgcagaaagaaatgctgtaaatgcaccaattcaaggttctgctgcagacattattaag
ctagccatgataaatattcacaaacgttttgaagaagaaaattttaaatcgaaaatgtta
ttgcaagtacatgatgagttggtttttgatgctcataaagacgaattagaaacaattaaa
ccaatgataaagcacgaaatggaaaatgcttttaaaatggaagtacctttagatgtcgaa
atagatacaggtttaaattggttagaggcacactag

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