Polaribacter batillariae: JL193_12890
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Entry
JL193_12890 CDS
T08207
Symbol
aspS,gatB
Name
(GenBank) bifunctional amidotransferase subunit GatB/aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pbat
Polaribacter batillariae
Pathway
pbat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JL193_12890 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbat01007
]
JL193_12890 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbat03016
]
JL193_12890 (aspS)
03029 Mitochondrial biogenesis [BR:
pbat03029
]
JL193_12890 (aspS)
Enzymes [BR:
pbat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JL193_12890 (aspS)
Amino acid related enzymes [BR:
pbat01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JL193_12890 (aspS)
Transfer RNA biogenesis [BR:
pbat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JL193_12890 (aspS)
Prokaryotic type
Other AARSs
JL193_12890 (aspS)
Mitochondrial biogenesis [BR:
pbat03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JL193_12890 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2d
tRNA-synt_2b
DUF4923
Motif
Other DBs
NCBI-ProteinID:
QTD37013
LinkDB
All DBs
Position
complement(2901858..2905211)
Genome browser
AA seq
1117 aa
AA seq
DB search
MELDQIHDALKAHDLELIIGLETHVRLNTNTKLFCSCPNEETEIPNTNICSVCTGQMGVL
PAINKEAITKAIYFGKAVKSTFSNEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGEVSC
FRNDGSQFTVNLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTEPCIRNIEDASTY
AQYIQRIVQNLGVSEANLEKGEFKSDVSVSLRKKHTYNLNPRTEIKNLNSFKFMVDALKE
EVEKQLNYYIEHKEFRPDQTTVLWDADLKQTKTMRKKEFEADYRFIAEPDIPFVSIKEVV
NSIKIDASALPHAVESVLIKGGVLPQDAKFFTADAIRSKTFMTINNAIQDPSFVAKTLVN
NLGAEEYKNIHDINHLIEIFQLFKNDKITSVLVQNGITSYLKDRTFDFKKYFDDNTISEA
QIFEAIEKVISENEAIANDIKAGNQGKAGILVGKVIAIIGKGASGKAIRAGILEQLAGEK
AGSEKMEVGSDKSEDGSRKLEAGSESKFEKEEELPEIPIVIKEEYRTHKISQLSEESITQ
KVTLSGWVSSVRDHGELMFIDLRDSSNQVFQVRLSRESFPNLDELVKLKPESVISVTGVV
VQRNKDDYNASLRTGKIELETSTLEILNLSKTLPFEIKRATKSNETVRFQYKFLDHRNNE
VRRAIVNRHKVIKLLRDILDEEEFLEIETPILTAGTDEGAREFIVPTRKQSGSFYTLPQA
PQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYVSMQQIIDLNTKMFN
EVVRKIYGKKWILHPFEVITYKDAMDKYGCDRPDLRYGLQMQDITNIVKDTTFQVFSKPI
EEGGIVKCIKVSAKEQGNKRMSKGQIENLTAIAQQNGLGGLAYIIVNENDLQSPIIKFLG
EEIAENIIKITNAKVGDIVFFSAADYATANKALDAVRQEMGRILKLINPKELRPAWVIDF
PMFEKTEEGRWTFTHNPFSMPAVYDLEKHMNGNDEEIGTIIAQQYDLILNGYEIGGGSVR
AHKAEILEATYKNMGYNKEEMLKSVGTMYKAFQYGAPPHGGIAWGIDRLMMILEKKASIR
EVMAFPKTGSSEDLLFNAPSILSDKKVEEMNVKIIRK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggaattagatcaaatacacgatgctttaaaagcacacgatttagaattaattatcggt
ttagaaacgcatgttcgtttaaatacaaacacaaaattattttgttcttgccccaatgaa
gaaacggaaattccgaatacgaatatctgttcggtttgtactggacaaatgggcgtttta
ccagcaataaataaagaagcgattacaaaagcaatttactttggaaaagccgtaaaatca
acattttcgaatgaagtaatttcttgggacagaaaacattacgaataccctgataatcca
aaaaacatacaaattacacagtttcataatcctgtaattccagatggagaagtttcttgt
tttagaaatgatggttcgcaatttacggtaaatttaacgcaagttcatatcgaggaagat
gctgcaaaattaatgcacgaaaagaaaatttcgttagtcgattttaacaaagctggagtt
cctttaattgaaattgttacggaaccttgtattagaaatatagaagatgcatctacgtat
gcacaatatattcaacgaattgtacagaatttaggagtttctgaagcgaatttagaaaaa
ggtgagttcaaatcggatgtttctgtgtcgcttcgtaaaaaacatacctataatttaaac
ccaagaaccgaaatcaaaaacctgaattcttttaagtttatggtggatgctttaaaagaa
gaggtagaaaaacagttaaattattatatagaacacaaagagtttaggccagaccaaacc
acggttttatgggatgcagatttaaagcaaaccaaaaccatgcgtaaaaaggagtttgaa
gcagattatcgctttattgcggaaccagacattccttttgtgtcgataaaagaagtggta
aattctataaaaatcgatgcaagtgcattgccacatgcagtagaatctgtattaattaaa
ggtggtgttttacctcaagatgccaagttttttacggcagatgccattcgttctaaaaca
tttatgacgattaataatgcgattcaagatccgtcttttgtggcaaaaacgttggtaaac
aatctgggtgcagaggaatataaaaacattcacgatatcaatcatttaattgaaattttc
caattgtttaaaaatgataaaattacgtctgttttggttcaaaacggaattacatcctac
ttaaaagacagaactttcgattttaaaaagtattttgatgacaataccatttcggaagct
caaatttttgaagctatagaaaaagtaatttcagaaaatgaagccattgcaaacgatatt
aaagcaggaaaccaaggaaaagcaggaattcttgtcggaaaagtaattgcaattattggt
aaaggtgcttctggaaaagcgattcgagctggaatattggagcaacttgctggagaaaaa
gcaggaagtgagaagatggaagttggaagtgacaaatctgaagatggaagtaggaagttg
gaagctggaagtgaatcgaaatttgaaaaagaagaggaattaccagaaattcctattgtt
ataaaagaagaatacagaacgcataaaatttcgcaattatctgaagaatctattacccaa
aaagtgactttatctggttgggtttcgagtgtaagagatcatggagaattaatgtttatc
gatttacgagattctagcaatcaggtttttcaagttcgtttgagtagagaatcgttcccg
aatttagatgaactggtaaagttgaaaccagaatctgtgatttctgtgactggagttgtg
gttcaaagaaataaagacgattataatgcaagtttaagaaccggtaaaattgaattagaa
acatcaactttagaaattttaaacctttctaaaaccttaccttttgaaataaaaagagcc
acaaaatcgaatgaaacggttcgttttcaatataaatttttagatcacagaaataatgag
gttcgtagagccattgtaaatcgtcataaagtaattaaattacttcgagatattttagat
gaagaagaatttttagaaatcgaaacgcctattttaactgcaggaacagatgaaggtgcc
agagaatttattgtgccaacaagaaagcaatcaggttctttttacacgttgccacaagca
ccacaacaattcaagcaaatgttaatggtaggtggatttgaaaaatattttcaaattgca
cgctgttttagagacgaagattctcgtggagacagacagccagaatttacacaattagat
atcgaaatggcatatgtaagtatgcaacaaatcatcgatttaaacacaaaaatgtttaat
gaagtggtgcgtaaaatttatggcaaaaaatggattttacatccttttgaagtcattact
tataaagatgccatggataaatatggttgtgacagaccagatttacgttacggtttgcaa
atgcaagacattacaaacattgtaaaagatactacttttcaggtttttagtaaacccatt
gaagaaggtggaattgtaaaatgtatcaaggtttctgcaaaagaacaaggaaacaaaaga
atgtctaaagggcaaattgaaaatttaactgccattgcacagcaaaatggtttaggaggt
ttggcttacattattgtaaatgaaaatgatttacaatcgccaataattaagtttttaggc
gaagaaattgcagaaaacatcataaaaattaccaatgcaaaagtgggcgatattgtattt
ttctctgcagcagattacgcaactgcaaataaagcgttggatgccgttcgtcaagaaatg
ggacgtattttaaagttgataaacccaaaagaattaagaccagcttgggtaatagatttt
ccaatgttcgaaaaaacagaagaaggaagatggacgtttacgcacaatccattttcgatg
ccagcagtgtatgatttagaaaaacatatgaatggaaatgatgaagaaattggaaccata
atcgcacaacaatacgatttaattttaaatggttatgaaattggtggaggttccgttcgt
gcgcacaaagcagaaattttagaagccacctataaaaatatgggttataataaagaggaa
atgcttaaaagcgtaggaaccatgtacaaagcattccaatatggagcgccaccacatgga
ggaattgcttggggaattgatcgcttaatgatgattttagaaaagaaagcatctattaga
gaagtaatggcatttccaaaaacaggttcatccgaagatttattattcaatgcaccttca
attttgtctgataaaaaggtagaagaaatgaatgtgaagattattcgtaaataa
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