Pseudomonadaceae bacterium T75: OS670_01280
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Entry
OS670_01280 CDS
T08742
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OS670_01280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbau03019
]
OS670_01280 (recQ)
03400 DNA repair and recombination proteins [BR:
pbau03400
]
OS670_01280 (recQ)
Enzymes [BR:
pbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OS670_01280 (recQ)
Messenger RNA biogenesis [BR:
pbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OS670_01280 (recQ)
DNA repair and recombination proteins [BR:
pbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OS670_01280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r4_2
HTH_23
HTH_20
HTH_7
GerE
HTH_29
PAX
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WAD26982
LinkDB
All DBs
Position
262092..264215
Genome browser
AA seq
707 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQGAIIERVAQGGDALVLMPTGGGKSLCYQVPALLREGLT
VVVSPLIALMDDQVATLEELGVSAVALNSTLSADDQREIAERLRRNEIKMLYLAPERLVQ
PRMLAFLQRLQIGLFAIDEAHCVSQWGHDFRPEYLQLGQLAEFFPAVPRIALTATADKRT
REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK
VDDLAAFLTEQGFPALPYHAGLPNELRAFHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEVLPEPCGHCDNCVDGVQTWDATEPARQALSAIYRSG
QRYGVGHLVDVLLGRDNEKVRNPGHQHLSVFGVGKGMSEGEWRSLFRQLVARGLADVDLE
GFGGLRLSDSCRPLLRGEVKLELRRELASKAPKSSASAASQLVRSEERETWEALRTLRRK
LAEEHGVPPYVIFPDATLLEMLRSQPSSLADMARISGVGARKLERYGQAFLEALQGSGAV
VKSPADVRHELITLARAGMTPAQIARQLDCSEKNVYAMLAEAIGSQQLSLEQALDLPEDL
LEEIQEAFLDGEGELPPVAAVAERFAGRVPDAVLFCVRAALQTEFEL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacagcgcatactcaaagacgtattcggctacgacgccttccgtggc
aaccagggcgcgatcatcgagcgggttgcccagggcggcgatgcactggtgctgatgccc
actggcggcggcaaatcgctctgctaccaggtaccggcgctgttgcgcgaggggctgacc
gtggtggtttcgccgttgatcgcattgatggacgatcaggtagcgaccctcgaggagctc
ggcgtttcggccgtggcgctgaactccacgctgagcgccgatgaccagcgcgagatcgcc
gagcggctgcgtcgcaacgaaatcaagatgctctatctggcaccggaacgtctggtccag
ccgcgcatgctggcattccttcaacgtctgcagatcggcctgttcgccatcgatgaagcc
cattgcgtatcgcagtgggggcatgatttccggcccgagtacctgcaactgggccagttg
gccgagttcttcccggcggtgccgcgcattgccctgactgccaccgcggacaagcgtacc
cgcgaggaaatcgtccagcgcctgcacctggaaaatgccgagcgctttctctccagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggagcagccgcgcaagcagttgctg
ggctttctcgccgaacggcgtggcgatgcgggtatcgtctactgcatgtcgcgcaagaag
gtcgacgacctcgccgcgttcctgaccgagcagggttttcctgcgctgccctaccacgcg
gggctgcccaacgagctgcgtgccttccatcagaagcgcttcctcaacgaggaaggcctg
atcatggtcgccaccatcgccttcggcatgggaatcgacaagcccaacgtacgcttcgtc
gcgcacctggatctgcccaagtcgctggaagcctattaccaggaaaccgggcgcgccgga
cgcgacggcctgccagccgatgcctggatggcctacgggctgcaggatgtgatcttcctc
aagcagatgctcaacaattccgagggtgacgagcgccacaagcgggtcgagcagcacaag
ctcgatgccatgctggcgctgtgcgaggaaacccgctgtcggcgccaggcgttgctcgcc
tacttcgacgaagtgctgcccgagccttgtggccattgcgacaattgtgtcgacggcgta
cagacctgggatgccaccgaaccggcgcgccaggccttgtcggcgatctaccgcagtggg
cagcgctacggcgtcgggcacctggtggacgtgctgctggggcgtgacaacgagaaggtt
cgcaatcccggccatcagcacctgtccgtcttcggcgtcggtaagggtatgtcggaaggg
gagtggcgttccctgtttcgccaactggtggcgcgggggctcgccgatgtcgacctcgag
ggctttggcggtttgcgtctgagcgacagttgtcgaccattgctgcgcggcgaggtgaag
ctggagctgcgtcgcgaactggccagcaaggcgcccaagtcctccgccagtgctgccagc
cagttggtgcgcagcgaagagcgcgaaacctgggaagcgctacgcaccctgcgccgcaag
ttggccgaggagcatggtgtgccgccttacgtcatcttccccgacgccacactgttggag
atgctgcgcagccagccgagctccctcgccgacatggcgcgcatcagcggtgtcggcgcg
cgcaagctggaacgttacggccaggcttttctcgaagcgctgcagggcagcggggcggta
gtcaagtcgcctgcagacgtgcgccatgaattgatcaccctggcgcgcgccgggatgacg
ccggcacagatcgctcgccagctcgattgcagcgagaagaacgtctacgcgatgctggcc
gaagccattggctcgcagcaactgagtctcgaacaggcgctggatctgccggaggacctg
ctggaagagattcaggaggccttcctcgatggtgaaggcgagctgcctccggttgctgcc
gtggcagagcgctttgccgggcgcgttccggatgcggtgctcttctgcgtgcgtgcggcg
ctgcaaacggagttcgaactctag
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