Pseudomonadaceae bacterium T75: OS670_01980
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Entry
OS670_01980 CDS
T08742
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbau
Pseudomonadaceae bacterium T75
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbau03032
]
OS670_01980
03400 DNA repair and recombination proteins [BR:
pbau03400
]
OS670_01980
Enzymes [BR:
pbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OS670_01980
DNA replication proteins [BR:
pbau03032
]
Prokaryotic type
DNA Topoisomerases
OS670_01980
DNA repair and recombination proteins [BR:
pbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OS670_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WAD27105
LinkDB
All DBs
Position
complement(422712..423794)
Genome browser
AA seq
360 aa
AA seq
DB search
MSDQRLPLAEGERPVPLDETGDTGTPLCPELPPDLHYVDDSQPGISRRRLRGKFVYFNLQ
GERIRDPVEVRRIDQLAIPPAYQDVWISPDPQGHLQATGHDARGRKQYRYHPRWREIRDS
DKYERMLAFGQALPKLRGGLEKHLSLPGMPREKVMALVVTLLESTLIRIGNPRYARSNRS
YGLTTLRTRHVDIHGTSIRFQFRGKSGVEHKVTLRDRRLARLMRRCMELPGQQLFQYLGD
DGQRRTVSSSDVNGYLREMTGCDFTAKDYRTWAGSALALEHLRRLKCTSEAETRKSLLET
VKQIASQLGNTPAVCRQCYIHPAILHAFGEGTLGSLRAARKRKWLSSEEATLLAFLRQQV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccagcgcctgccgcttgccgaaggtgagcggcctgtccctctcgatgaaacc
ggcgacaccggcaccccgctctgccccgagctgccgccggacctgcattacgtcgatgat
agccagcccggcataagtcgccgacgcctgcggggcaagttcgtctacttcaatctgcag
ggcgagcgcatccgagatccagtggaggtacggcggatcgaccagctggcgattccgccg
gcctaccaggacgtatggatatcaccggacccacagggccatctgcaggccacgggacac
gatgcgcgcgggcgaaagcagtatcgttatcacccgcgctggcgagagattcgcgacagc
gacaagtacgagcgcatgctcgcattcggtcaggcgctgccgaaactgcgtggcggcctg
gagaagcacctgtccctgcctggaatgccacgtgaaaaggtcatggcgctggtggtgacg
ctgctggagtcgacgctgattcgcatcggcaacccgcgttatgcgcgcagtaaccgctcc
tacgggctgactacgctgcgcacccgccacgtcgatattcatggcacgtcgattcgcttc
cagtttcgcggcaagagcggtgtggagcacaaggtcaccttgcgcgatcggcgtctggcc
aggctcatgcgccgctgcatggagctgccgggacagcaattgttccagtacctgggcgac
gacggccagcgccgaaccgtcagctccagcgacgtgaacggttatctgcgggagatgacc
ggctgcgatttcaccgccaaggattaccgcacctgggccggcagcgcgctggcactcgaa
catctgcgcaggctgaagtgcacctccgaagccgagacccgaaagagtctgctcgaaacg
gtcaaacagatcgccagccagctcggcaacacgcccgccgtctgccgccagtgctacatc
cacccggcgatcctacacgccttcggcgaaggtacgctgggcagtctgcgcgccgcacgc
aaacgcaaatggctgagttcggaagaagccaccctgctggcgtttctccgccagcaggtc
tag
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