Pseudomonadaceae bacterium T75: OS670_05610
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Entry
OS670_05610 CDS
T08742
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbau
Pseudomonadaceae bacterium T75
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbau03032
]
OS670_05610 (topA)
03400 DNA repair and recombination proteins [BR:
pbau03400
]
OS670_05610 (topA)
Enzymes [BR:
pbau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OS670_05610 (topA)
DNA replication proteins [BR:
pbau03032
]
Prokaryotic type
DNA Topoisomerases
OS670_05610 (topA)
DNA repair and recombination proteins [BR:
pbau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OS670_05610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF2399
Toprim_4
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
WAD27769
LinkDB
All DBs
Position
complement(1230090..1232702)
Genome browser
AA seq
870 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASREPVKRGKAAAAEAPA
LSPKEKAKRQLFTRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKEADTIYLATDLDREG
EAIAWHLRESIGGDDSRFKRVVFNEITKKAIQEAFSKPGELDINRVNAQQARRFLDRVVG
YMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLATADKAKVRF
EVTRENGEAFKPLNEGHAMAALEQLQGANYSVSKREDKPTSSKPSAPFITSTLQQAASNR
LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAIGMVRGFIQDEFGDKYLPEKPNVYS
SKEGAQEAHEAIRPSDVNLRPNQLSGMERDAERLYDLIWRQFVACQMPPAQYLSTSVVVT
AGNFELRAKGRILKFDGYTKVMPQQSKGGEDDVLPEMNKGDAMALLKLDPSQHFTKPPAR
YSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVSLHNRRFYSEKMGDIVTERLSESFNN
LMDYGFTAGMEEHLDDVAQGEREWKAVLDEFYGDFRKKLEIAEAGENGMRANQPTLTDIP
CKVCGRPMMIRTASTGVFLGCSGYSLPPKERCKSTVNLIPGDEIAADDEGESESRVLLGK
RRCSICSTAMDAYLLDETHKLHICGNNPDCTGYEIEEGQYRIKGYEGPSLECDKCGSEMQ
LKTGRFGKFFGCTNAECKNTRKLLKSGEAAPPKMDAVKMPELKCEKVDDTYVLRDGASGL
FLAASQFPKNRETRAPLVLELIPHKDEIDPKYHFLLDAPKKDPEGRPAVIRYSRKTKEQY
VQTEVNGKPTGWKAFFDGGKWKIEDKSVKG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatcaccggccaaggccaagaccatcaacaagtac
ctgggcaaccagtacgtggtgaaatcgagtatcggccacatccgcgaccttcccaccagc
ggttccgcctcccgcgagccggtcaagcgtggcaaggccgcggccgccgaagcgccggcg
ctgtcacccaaggaaaaggccaagcgccagctgttcacccgcatgggcgtcgatcccgag
cacggctggaaggccaagtacgagatcctgccgggcaaggagaaggtgatcgaggaactg
cgtcgcctggccaaggaagccgacaccatctatctcgcgaccgacttggatagagagggg
gaggcgattgcctggcacctgcgcgaatccatcggcggcgacgacagccgcttcaagcgc
gtggtgttcaacgagatcaccaagaaggccatccaggaagccttttccaagccgggcgag
ctggatatcaaccgtgtcaacgcgcaacaggcgcggcgcttcctcgaccgcgtggtgggt
tacatggtctcgccgctgctgtgggcgaagatcgcccgcgggctgtcggccgggcgcgtg
cagtcggtggcggtgaagctggtggtcgagcgcgagcgcgagatccgcgccttcgtgccg
gaagagtactgggaagtgcacgccgacctggcgacggccgacaaagccaaggttcgcttc
gaggtcacccgcgagaatggcgaggccttcaagccgctgaacgaaggccatgccatggcc
gcgctggagcagctgcagggcgccaactacagcgtcagcaagcgcgaggacaagccgacc
agcagcaagccgtccgcacccttcatcacttcgaccctgcagcaggcggcgagcaatcgt
ctcggcttcggcgtgaagaagaccatgatgatggcccagcggctgtacgaagccggctac
atcacctacatgcgtaccgattcgaccaacctctcggcggacgccatcggcatggtgcgc
ggtttcatccaggacgagttcggcgacaagtacctgccggagaaacccaacgtctattcc
agcaaggaaggcgcccaggaagcgcacgaagcgatccggccgtccgacgtcaacctgcgc
cccaaccagctctcgggcatggagcgcgatgccgagcgcctctacgacctgatctggcgc
cagttcgtggcctgccagatgccgccggcgcagtacctgtccaccagcgtcgtggtcacg
gcgggcaatttcgagctgcgcgccaagggccgtatcctcaagttcgacggctacaccaag
gtcatgccgcagcagagcaagggcggcgaagacgatgtgctgccggaaatgaacaagggc
gacgccatggcgctgctcaagctcgacccgagccagcacttcaccaagccgccggcgcgc
tattccgaagcgagcctggtcaaggagatggaaaagcgcggcatcggtcgtccgtccacc
tatgcggcgatcatttccaccatccaggatcgaggctacgtgtcgctgcacaaccgtcgt
ttctactccgagaagatgggcgacatcgtcaccgagcgcctttcggagagtttcaacaat
ctgatggactacggcttcaccgccggcatggaagaacacctcgacgacgtcgcccagggc
gagcgcgagtggaaggccgtgctggacgagttctacggtgacttccgcaagaagctggag
atcgccgaagccggcgagaatggcatgcgcgccaaccagccgactctgaccgatatcccg
tgcaaggtctgtggccggccgatgatgatccgcaccgcctccactggcgtgttcctcggc
tgctccggctacagcctgccgccgaaggagcgctgcaaatccacggtcaacctgattccg
ggcgacgagatcgccgccgacgacgagggtgagtccgaatcgcgggtgttgctgggcaag
cgccgctgctcgatctgcagtaccgccatggatgcctatctgctggacgagacgcacaag
ttgcatatctgcggcaacaacccggattgcaccggctacgagatcgaagaggggcaatac
cgcatcaagggctacgaaggcccgagcctggaatgcgacaagtgcggcagcgaaatgcag
ctcaagaccggtcgtttcggcaagttcttcggctgtaccaatgccgaatgcaagaacacc
cgcaagctgctcaagagcggcgaggcggcgccgccgaagatggatgcggtgaagatgccc
gagctcaagtgcgagaaggtcgatgacacctatgtgctgcgcgatggcgcgtccgggctg
ttcctggctgccagtcagttcccgaagaaccgcgagacccgcgcaccgctggtgctggag
ctgatcccgcacaaggatgagatcgatccgaagtatcacttcctgctggatgcgccgaag
aaggacccggaaggccggccagcggtcatccgctacagccgtaagaccaaggagcagtac
gtgcagaccgaggtgaacggcaagccgacgggctggaaagccttcttcgacggcggcaag
tggaagatcgaggacaagagcgtcaaaggctga
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