Pseudomonadaceae bacterium T75: OS670_05625
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Entry
OS670_05625 CDS
T08742
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau00071
Fatty acid degradation
pbau00280
Valine, leucine and isoleucine degradation
pbau00310
Lysine degradation
pbau00362
Benzoate degradation
pbau00380
Tryptophan metabolism
pbau00410
beta-Alanine metabolism
pbau00640
Propanoate metabolism
pbau00650
Butanoate metabolism
pbau00907
Pinene, camphor and geraniol degradation
pbau00930
Caprolactam degradation
pbau01100
Metabolic pathways
pbau01110
Biosynthesis of secondary metabolites
pbau01120
Microbial metabolism in diverse environments
pbau01200
Carbon metabolism
pbau01212
Fatty acid metabolism
Module
pbau_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OS670_05625 (fadB)
00650 Butanoate metabolism
OS670_05625 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OS670_05625 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OS670_05625 (fadB)
00310 Lysine degradation
OS670_05625 (fadB)
00380 Tryptophan metabolism
OS670_05625 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OS670_05625 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OS670_05625 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OS670_05625 (fadB)
00930 Caprolactam degradation
OS670_05625 (fadB)
Enzymes [BR:
pbau01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OS670_05625 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OS670_05625 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OS670_05625 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OS670_05625 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
WAD27772
LinkDB
All DBs
Position
complement(1234493..1236640)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDAIKGDASVKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLGVPTVVAINGIALGGGFE
MCLAADYRVMSATAKVGLPEVKLGIYPGFGGTVRLPRVIGVDNAVEWIASGKENRAEDAL
KVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETSKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFAKLAKTSVAESLVGLFLSDQEL
KKKAKNYDKQAREVKLAAVLGAGIMGGGIAYQSAIKGTPILMKDIREEGIQMGLDEASKL
LGKRVEKGRMTPAKMAEALNAIRPTTSYGDFGNVDIVVEAVVENPKIKQAVLAEVEGLVR
EDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSETAIATTVA
YAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRADKVMEKFGWPMGPAYL
MDVVGMDTGHHGRDVMAEGFPDRMKDDSKTAVDVMYEANRLGQKNGKGFYAYEVDKKGKP
KKVVDPQSYELLKPIVSETRELSDEDIINYMMIPLCLETVRCLEDKIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAANGQRFYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcaccctcaatgaactg
cgccaggctgtcgatgccatcaagggcgacgcttcggtcaagggcgtcatcgtcaccagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctc
ccggacgaggaactggtcgccggcaacctcgaagcgaacaagatcttcagtgatttcgaa
gacctgggcgtgcctaccgtcgtcgccatcaacggtatcgccctgggtggcggtttcgag
atgtgcctggcggccgattaccgtgtcatgtccgccaccgccaaggtcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcgtgatcggt
gtcgacaacgccgtcgagtggatcgcctcgggcaaggaaaaccgcgccgaagacgccctg
aaagtacatgccgtcgatgccgtggtcgcgccggagaagctgcaggaagctgcgttggac
ctggtcaagcgcgccatttccggcgagctggactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgccatcgagcagatgatggccttcgagacctccaagggcttt
gtcgccggccaggccggtccgaactacccggcgccggtcgaagccatcaagaccattcag
aaagcggccaacttcggtcgcgacaaggccatcgaagtcgaggctgccggcttcgccaag
ctggccaagacctcggtcgccgagagcctggtcggcctgttcctcagcgaccaggaactg
aagaagaaggccaagaactacgacaagcaggcccgtgaagtgaaactggccgccgtgctg
ggcgccggcatcatgggtggcggcatcgcctaccagtcggccatcaagggcacgccgatc
ctgatgaaggatatccgcgaggaaggcatccagatgggcctggacgaggcgtccaagctg
ctcggcaagcgcgtcgagaagggtcgcatgaccccggcgaagatggccgaagccctcaat
gcgattcgcccgaccacttcctatggtgatttcggcaacgtcgacatcgtcgtcgaggcc
gtggtcgagaatccgaagatcaagcaggctgtgttggccgaagtggaaggcctggtgcgt
gaagacgcgatcatcgcctccaacacctcgaccatctccatcagcctgctggcccaggcg
ctcaagcgtccggaaaacttctgcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagaccagcgaaaccgccatcgccaccaccgtcgcc
tacgccaagaagatgggcaagagcccggtcgtggtcaacgattgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgcccgtgccatcgcccacggtgtcgac
ttcgtacgcgccgacaaggtgatggagaagttcggctggcccatgggcccggcttacctg
atggacgtcgtcggcatggacaccggccaccacggccgtgacgtgatggccgaaggcttc
ccggatcgcatgaaggacgacagcaagaccgcggtcgacgtcatgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctatgaagtggacaagaagggcaagccg
aagaaggtcgtcgacccgcagtcctacgaactgctcaagccgatcgtcagcgagacccgc
gagctgtccgacgaggacatcatcaactacatgatgatcccgctgtgcctggaaaccgtt
cgctgcctggaagacaagatcgtcgaaaccgccgccgaagccgacatgggcctgatctat
ggcatcggtttccctcccttccgtgggggtgcactgcgctacatcgattcgatcggtgtc
gccgagttcgtggcgctggcggacaagtacgccgacctgggcccgctgtaccacccgact
gcgaagctgcgtgaaatggctgccaacggccagcgcttctacggttaa
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