Pseudomonadaceae bacterium T75: OS670_10160
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Entry
OS670_10160 CDS
T08742
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau00300
Lysine biosynthesis
pbau00470
D-Amino acid metabolism
pbau01100
Metabolic pathways
pbau01110
Biosynthesis of secondary metabolites
pbau01120
Microbial metabolism in diverse environments
pbau01230
Biosynthesis of amino acids
Module
pbau_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OS670_10160 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OS670_10160 (dapF)
Enzymes [BR:
pbau01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
OS670_10160 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WAD28610
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Position
2169795..2170625
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVIDLISQHAHIQPKHARQWGDRHTGVGFDQLLLVEPPHDPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRRIRVETKGGVIELNIRADGQIGVDM
GPPRLVPSEIPFQADAEALSYPLKVDGQQLEIAAISMGNPHAVLRVDDLDKAPVHELGPR
IEHHPRFPQRVNAGFLQVVDRQHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgcttcaccaagatgcacggcctgggcaatgacttcatggtcatcgacctg
atcagccagcacgcgcatatccagcccaagcacgccaggcaatggggcgaccggcatacc
ggcgtgggcttcgaccagctgctgctggtcgaaccgccgcacgatccggacgtcgacttc
cgctaccgcatcttcaattccgacggctcggaagtggagcaatgcggcaacggcgcgcgc
tgcttcgcgcgcttcgtgctggacaagcgcctgaccaccaagcgccggatacgcgtcgag
accaagggcggcgtcatcgagctgaacattcgcgccgatggccagatcggcgtcgacatg
ggcccgccacgactggtgccgagtgaaatccccttccaggccgacgccgaggcgctgagc
tatccgctgaaggtcgacggccagcagctggagatcgccgcgatctccatgggcaacccc
cacgccgtgctgcgtgtggatgatctcgacaaggcgcccgtgcacgagctgggccctcgg
atcgaacatcacccgcgtttcccccagcgggtcaatgccggttttctgcaggtcgtcgat
cgccagcatgcgcggttgcgcgtctgggaacgcggcgccggcgaaacccaggcctgcggc
accggcgcctgcgccgctgccgtcgccgcgattcgccagggctggatggattcgccggtg
cagatcgacctgccgggcggccgtctgtccatcgaatgggcaggccctggccagcccgtt
atgatgaccggccccgccgttcgcgtttacgaaggacaggttcgcctatga
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