Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
pbau Pseudomonadaceae bacterium T75
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pbau00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OS670_11910 (polA)
03410 Base excision repair
OS670_11910 (polA)
03420 Nucleotide excision repair
OS670_11910 (polA)
03440 Homologous recombination
OS670_11910 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pbau03032]
OS670_11910 (polA)
03400 DNA repair and recombination proteins [BR:pbau03400]
OS670_11910 (polA)
Enzymes [BR:pbau01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OS670_11910 (polA)
DNA replication proteins [BR:pbau03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OS670_11910 (polA)
DNA repair and recombination proteins [BR:pbau03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OS670_11910 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OS670_11910 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2568762..2571506)
|
AA seq |
914 aa
MSQTPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDELFAEYKSHRPPMPDDLRGQIEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVRTKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGISGGLKGLYDNLDQVAALPIRGAKSLGAKLEEHREA
AFMSYELATIKIDVPLDVQVADLMPGEPHREALIALYRELEFKQWLDELLREAKAAGENC
EVAPEDCSIQAEAQYDTILEQAEFDAWLARLQAADCFAFDTETTSIDAQQAQLVGVSFAI
ETGKAAYVPLCHSYMGVPQQLDRDAVLAALKPLLEDPNKQKICQHGKYDMNVLMHYGIEL
RGQAYDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHETLLGKLEATPSLLEVLREIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGEKLVALEREAYELAGEEFNLGSPKQLCAILYEKLGCPVLSKTAGGQPSTAESVLA
ELADRDYPLPKVIMQHRSLSKLKGTYTDKLPQQINLRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNGLDVH
RATAAEVFGVELAQVTSDMRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRAQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQESGLDARVILQVHDELVLEVREDLLDQVRDAISPLMSQAAELDVPL
LVETGVGANWDEAH |
NT seq |
2745 nt +upstreamnt +downstreamnt
atgagtcaaacgcccctcgttctggtggacggttcgtcctatctttaccgcgccttccac
gccctgccgccgctgaccacctccaccggcaaaccgaccggcgcggtgaagggcgtgttg
aacatgctgctgtcgctgcgccggcaatatccggacagccccttcgccgtggtcttcgat
gccaagggcccgaccttccgcgacgagctgttcgccgaatacaaatcccaccgcccgccg
atgccggatgatctgcgcggccagatcgagccactgcatgccagcgtgcgtgcgctgggc
ctgccgctgctctgcgtcgagggggtcgaggcggatgacgtgatcggcaccctggcgcgg
caatgcgcggcgctggggcgcgacgtggtgatttccaccggcgacaaggacatggcgcag
ctggtctgcccgcacgttaccctggtcaacaccatgaccggtagcgtctacgacatcgaa
ggcgtacgcaccaagttcggtgtcgggccggagctgataatcgatttcctcgcgctgatg
ggcgacaaggtcgacaacatccccggcgtgcccggcgtcggcgaaaaaaccgcctgcggc
ctgctcaacggcatttccggcggactcaagggcctctacgacaacctcgaccaggtcgcg
gcgctgccgattcgtggcgccaagtccctgggggccaagctggaggagcaccgcgaggcg
gccttcatgtcctacgagctggcgaccatcaagatcgatgtgccgctggatgtgcaggtg
gccgacctgatgcccggcgagccgcaccgcgaggcgctgatcgcgctctaccgcgaactg
gagttcaaacagtggctcgacgagctgctgcgcgaggccaaggcggcgggcgagaattgc
gaagtcgcccccgaggattgctcgatccaggccgaggcgcagtacgacacgattctcgaa
caggccgagttcgacgcgtggctggcccgtctgcaggccgccgattgcttcgccttcgat
accgagaccaccagcatcgacgcgcagcaggcgcaactggtgggggtttccttcgccatc
gagaccggcaaggccgcctatgtgccgctgtgccattcctacatgggggtaccgcagcag
ctggatcgcgatgcggtactcgctgcgctcaagccgctgctcgaagatccgaacaagcag
aagatctgccagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagctg
cgcggccaggcctacgacaccatgctcgaatcctacgtgctggacgccaccgccacccgc
cacgacatggacagcctggcgctgaagtacctcggccgcggcaccatccgcttcgaggac
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggccggg
ccttacgcggccgaggatgccgacgtcaccctgcgtctgcacgagacgctgctgggcaag
ctggaggcgacgccgtcgctgctcgaggttctgcgcgagatcgagatgccgctggtgccg
gtgctggcgcgtatcgagcgcaacggcgccttggtcgacgcacagctgcttggccagcag
agcgtggaactgggcgaaaagctcgttgccctggagcgcgaggcttatgaactcgccggc
gaggaattcaacctcggctcgcccaagcagctttgcgccatcctctatgaaaagctcggc
tgcccggtgttgtcgaaaaccgccggtggccagccctcgacggccgaaagcgtactggcc
gaactggccgatcgtgattatccgctgccaaaagtgatcatgcagcaccgtagcttgagc
aagctcaagggcacctacaccgacaagttgccgcagcagatcaacctgcgcaccgggcgc
atccacaccagttatcaccaggcggtgacggcgaccgggcgcctgtcctcgtccgacccg
aacctgcagaacatcccgatcagaacggccgaagggcggcgcatccgccaggccttcgtc
gccgcgcccggctacaagctgctggcggccgactactcgcagatcgagctgcgcatcatg
gcgcacctggcgcaggatgcgggcttgctgcatgccttccagaacgggctggacgtgcat
cgcgccactgccgccgaggtctttggcgtcgagctggcacaggtcaccagcgacatgcgg
cgcagcgccaaggcgatcaacttcggtctgatctacggcatgagcgcgttcggcctggcc
aagcagatcgacgtcggccgcaaggaagcgcaggaatacatcgatcgttacttcgcccgc
tatcccggcgtgctggcctacatggagcgcacccgcgcccaggccgccgagcagggctac
gtcgagacgctgttcggccgtcgcctctacctgcccgagatcaactccaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgctcccatgcagggcaccgcggcggac
atcatcaagcgcgccatgatcgcggtggatggctggctgcaggagagcggcctggatgcc
cgggtgattctgcaggtacacgatgaattggtgctggaggtgcgcgaggacctgctggat
caggtacgcgacgccatcagcccgctgatgagtcaggccgccgagctggacgtgccgctg
ttggtggaaaccggcgtgggcgctaattgggatgaggcgcactga |