Pseudomonadaceae bacterium T75: OS670_12035
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Entry
OS670_12035 CDS
T08742
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau00521
Streptomycin biosynthesis
pbau00523
Polyketide sugar unit biosynthesis
pbau00525
Acarbose and validamycin biosynthesis
pbau00541
Biosynthesis of various nucleotide sugars
pbau01100
Metabolic pathways
pbau01110
Biosynthesis of secondary metabolites
pbau01250
Biosynthesis of nucleotide sugars
Module
pbau_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OS670_12035 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OS670_12035 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OS670_12035 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OS670_12035 (rfbB)
00525 Acarbose and validamycin biosynthesis
OS670_12035 (rfbB)
Enzymes [BR:
pbau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OS670_12035 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WAD25167
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Position
2599517..2600590
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AA seq
357 aa
AA seq
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MRILVTGGAGFIGSALIRHLIRDTEHSVLNLDKLTYAGNLESLAEVDGDTRYQFLQADIA
DRERVSEALLEFQPDAIMHLAAESHVDRSIDGPAEFIQTNIVGTYQLLEAARAYWQSLPE
GRREAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGLP
VLITNCSNNYGPYHFPEKLIPLVILNALDGKPLPVYGDGAQVRDWLYVEDHARALFKVVS
EGKVGETYNIGGHNEQKNIDVVRGICALLEELAPSKPEGVARYEDLITFVKDRPGHDLRY
AIDAGKIERELGWVPQETFQTGLRKTVQWYLDNLEWCRRVQDGSYQRERLGALENIA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcgtcaccggcggggccgggttcatcggctcggccctgatccgccatctc
attcgcgacaccgagcacagcgtgctcaacctggacaagctcacctacgccggcaacctc
gaatccctggcggaagtggatggcgatacgcgctatcaattcctgcaggccgacatcgcc
gaccgcgagcgggtcagcgaagcgctgctggagttccagccggacgccatcatgcacctg
gccgccgaatcccatgtcgatcgctccatcgacggtccggccgagttcatccagaccaat
atcgtcggcacctaccagttgctggaagctgcccgcgcctactggcagagcctgccggaa
ggccgtcgtgaagccttccgcttccaccacatttccaccgacgaggtgtacggcgacctg
cacggcgtcgacgacctgttcaccgagaccacgccctacgcgcccagctcgccctattcg
gccagcaaggcttcgtccgaccatctggtccgtgcctggcagcgcacctatggcctgccg
gtgctgatcaccaactgctcgaacaactatggcccctatcacttccccgagaagctgatt
ccgctggtcatcctcaacgcgctggatggcaagccgctgccggtctacggcgacggcgcc
caagtgcgtgattggctctacgtcgaggaccacgcccgcgcgctgttcaaggtggtcagc
gaagggaaggtcggtgagacctacaacatcggcggccacaacgagcagaagaacatcgac
gtggtgcgcggcatctgcgcgctgctggaagagctggcgccgagcaagcccgaaggcgtg
gcgcgctatgaagacctgatcaccttcgtcaaggatcgccccggccacgacctgcgctac
gccatcgatgccggcaagatcgagcgcgagctgggctgggtaccgcaggaaaccttccag
accggcttgcgcaagaccgtgcagtggtacctggacaacctcgaatggtgccgtcgcgtg
caggatggcagctatcaacgtgagcgcctcggcgccctggagaacatcgcatga
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