Pseudomonadaceae bacterium T75: OS670_13040
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Entry
OS670_13040 CDS
T08742
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OS670_13040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbau03021
]
OS670_13040
Transcription machinery [BR:
pbau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OS670_13040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_28
HTH_11
Sigma70_ECF
HTH_3
GerE
HTH_Tnp_ISL3
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
WAD25350
LinkDB
All DBs
Position
2801315..2801830
Genome browser
AA seq
171 aa
AA seq
DB search
MATEGMLRQQLLHRLYVDHQGWLNGWLRRQLGCSQSAADLAQDTFVRLLGKDQDMTAIRE
PRAYLHTIAKGLLINHWRRRQVEQAYLDALALQPEALAPSPESQALIVETLLRIDAMLAR
LPAKVSAAFLMSQLHGMTYAAIAAELGVSERMIKKYMAQAMLHCLLLVEEP
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagggtatgctccggcagcagttgctgcatcggctgtatgtcgatcaccag
ggctggctgaacggctggttgcggcgtcaactgggctgcagccagagcgctgccgacctg
gcgcaggacaccttcgtgcggctgctgggcaaggatcaggacatgaccgcgatccgcgag
cccagggcctacctgcataccatcgccaaggggctgctgatcaaccactggcgccgccgc
caggtggaacaggcctatctcgatgccctggcactgcagccggaagcgctcgcgccttcg
ccggaatcccaggcgctgatcgtcgaaaccttgctgcgcatcgacgcgatgctggcccgg
ctacccgcgaaggtgagcgcggcatttctcatgtcccagctgcacgggatgacctacgcg
gcgattgcggcggagctgggtgtttccgaacgcatgatcaagaaatacatggcgcaggcg
atgctgcattgcctgttgctggttgaagagccatga
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