Pseudomonadaceae bacterium T75: OS670_14165
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Entry
OS670_14165 CDS
T08742
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OS670_14165 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pbau02022
]
OS670_14165 (algB)
Two-component system [BR:
pbau02022
]
NtrC family
KinB-AlgB (alginate production)
OS670_14165 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
cREC_REC
AAA_22
Mg_chelatase
AAA_2
AAA_16
HTH_17
Xre-like-HTH
HTH_23
nSTAND3
VpsR
MCM
AAA_19
Tnp_22_trimer
DUF1858
HTH_psq
IstB_IS21
HTH_28
DUF815
HTH_50
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WAD25558
LinkDB
All DBs
Position
complement(3058287..3059633)
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AA seq
448 aa
AA seq
DB search
MDQTTDTGGRILLVDDEAAILRTFRYCLEDRGYTVLTAASAAQAEAILQRQVFDLCFLDL
RLGEDNGLDVLQQMRVLAPWMRVVIVTAHSAVDTAVDAMQAGAADYLVKPCSPEQLRLSA
AKQLEVRQMAARLEALEGEVQQRNDAIGSHSPAMMGVVETARQVADTDANILILGESGTG
KGELARAIHNWSRRARKAFITINCPSLSADLMESELFGHNRGAFTGATESTLGRVNQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVREGKF
REDLLYRLNVITLNLPPMRERPEDVLALAERFLAFFVKSYGRPARGFSDGAIAALKAYRW
PGNVRELRNVVERASIICPQPMIEVSHLGLADQAASNAPRIGEPLSLEALEKAHIAGVLS
TSETLEQAARILGIDASTLYRKRKQYGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaacgaccgacaccggtggccgcatccttctggtggatgacgaagcagcgatc
ctgcgcaccttccgttactgcctggaggatcgcggctacaccgtgttgacagcggccagt
gcggcgcaggccgaagccattctgcaacgccaggtattcgacctgtgtttcctggacctg
cgcctgggcgaggacaacgggctggacgtcctgcagcagatgcgtgtgctggcgccctgg
atgcgggtggtcatcgtcaccgcccattcggcggtggataccgcggtggacgctatgcag
gcaggcgcggcggattacctggtcaaaccctgcagccccgagcaactgcgcctgtcggca
gccaaacaactggaagtccggcagatggccgcccgcctcgaggcgctcgaaggcgaagtg
caacagcgcaacgacgcgatcggctcgcacagcccggcgatgatgggcgtggtggagact
gcccggcaggtcgccgataccgatgccaacatcctcatcctcggcgaatccggcaccggc
aagggcgaactggcgcgcgccattcacaactggagcaggcgcgcacgcaaggccttcatc
accatcaactgcccgtcgctgtcggccgacctgatggagagcgagctgttcggccacaac
cgcggcgccttcaccggtgctaccgaaagcacccttgggcgcgtcaaccaggccgacggc
ggcaccctgttcctcgacgagatcggcgacttcccgctggcgctgcaacccaagctgctg
cgcttcatccaggacaaggaatacgagcgcgtgggcgacccggtcacccgacgcgccgat
gtgcgcatcctcgcggcgaccaacctcaacctcgaggaaatggtgcgcgagggcaagttc
cgcgaagacctgctctaccgcctaaacgtcatcaccctgaacctgccgcccatgcgcgag
cgtcccgaggacgtgctggccctggccgagcgcttcctggcgttcttcgtgaagagctac
gggcgcccggcacgcggcttcagcgacggagcgatagccgcgctcaaggcctatcgctgg
cccggcaacgtccgcgagctgcgcaacgtggtcgagcgcgccagcatcatctgtccgcag
ccgatgatcgaagtaagccatctcggtctggccgaccaggcggccagcaatgccccgcgg
atcggcgaacccctgagcctggaagccctggaaaaggctcacatcgccggtgtgctgagc
accagcgaaaccctcgagcaggccgcccgcatcctcggtatcgatgcctccacgctttac
cgcaagcgcaagcaatacggcctatga
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