Pseudomonadaceae bacterium T75: OS670_17345
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Entry
OS670_17345 CDS
T08742
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbau
Pseudomonadaceae bacterium T75
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbau03016
]
OS670_17345 (truB)
Enzymes [BR:
pbau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OS670_17345 (truB)
Transfer RNA biogenesis [BR:
pbau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OS670_17345 (truB)
Prokaryotic type
OS670_17345 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WAD26153
LinkDB
All DBs
Position
3714641..3715558
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AA seq
305 aa
AA seq
DB search
MAQVKRVRRAVSGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTTTADAEGEVLERRPVDVSREQLEAILPRFRGDIQ
QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLSLEADKARLAVACSKGTYI
RTLVEDIGRELGCGAHVAELRRIQAGPFELSQTVTLEALEQAHAEGGAEAVDAFLQPVDS
GLEHWPLLQFSEHSAFYWLHGQPVRAPEAPQFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgtgtgcgccgcgcagtcagcggcatcattctcctcgacaagccg
cgtggctttacgtccaacgcggcgctgcagaaggttcgctggttgctcaatgccgagaag
gccgggcataccggcagtctcgatccgctcgctaccggcgtgctgccgctgtgcttcggt
gaagccaccaagttctcccagtacctgctcgatgccgacaagggctacgagacgctggcc
cagctgggggtcaccaccaccaccgccgatgcggaaggcgaagtgctcgagcgcaggccg
gtggatgtcagccgggagcagctcgaagccatattgccgcgttttcgcggggatattcag
caggtgccgccgatgtactcggcgctcaagcgtgacggtcagccgttatacaagctggca
cgtgccggagaggtagtggagcgtgagccgcgttctgttaccattgcgcgcctggagctg
ctttcgctggaggcggacaaggcccggctcgcggtagcgtgcagcaagggcacctatatc
cgcaccctggtcgaggacatcgggcgcgaactgggttgcggggcgcatgtggccgagctg
cgacgcattcaggcagggccattcgagctgagccagaccgtcacgctcgaggcgctcgaa
caggcccatgccgaaggcggcgcggaggcggttgacgctttcctccagccggtcgacagc
ggcctggaacactggccgctgttgcagttttcggagcacagcgccttttactggctccac
ggacagccggtgcgagccccggaagcaccccagttcgggatggttcgggtgcaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ttgattcggtcggtatga
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