Pseudomonadaceae bacterium T75: OS670_17355
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Entry
OS670_17355 CDS
T08742
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbau
Pseudomonadaceae bacterium T75
Pathway
pbau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OS670_17355 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbau03019
]
OS670_17355 (pnp)
03016 Transfer RNA biogenesis [BR:
pbau03016
]
OS670_17355 (pnp)
Enzymes [BR:
pbau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OS670_17355 (pnp)
Messenger RNA biogenesis [BR:
pbau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OS670_17355 (pnp)
Transfer RNA biogenesis [BR:
pbau03016
]
Prokaryotic type
tRNA degradation factors
OS670_17355 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
WAD26155
LinkDB
All DBs
Position
3716116..3718221
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAISGIPFNGPIGAARVAFHPESGYLLNPTYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVIQAVAELAAEAGKPTWDWQPKAEN
TELLNAIRSEFGEAISQAYTIIIKQDRYARLGELREQIVARFANEEGQPSAAEVKDAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLGKTHGSALFTRGETQALVVATLGTA
RDAQILDTLEGEKKDPFLLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEQALEQALEARLNILGQMNQ
VIAQSRSELSANAPTMLAMKIDQDKIRDVIGKGGATIRGICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDQRV
EKVTDVLKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaatttcagttcggtcagtcgaccgtaaccctggagacgggc
cgtatcgcccgccaggcctccggcgccgtgctggtcaccgtcgatgacgacgtgagcgtg
ctggtcaccgtggtcggtgccaagaccgccgacccgagcaagggctttttcccgctgtcg
gtccactatcaggaaaaaacctacgctgccggcaagatcccgggtggattcttcaagcgt
gaggcgcgtccctccgagaaggaaaccctgacctcgcgcctgatcgatcgtccgatccgc
ccgctgttcccggaaggtttccagaatgaagtgcaggtcatctgcaccgtggtatcgacc
agcaagaagaccgacccggacatcgccgcgatgatcggtacctctgccgcgctggcaatc
tccggcattccgttcaacggcccgatcggcgctgcgcgcgtggccttccacccggaaagc
ggctacctgctgaacccgacctacgagcagctcaaggcttccagcctggacatggtcgtg
gccggtaccaaggacgccgtgctgatggtcgagtccgaggccaaggagctgaccgaagac
cagatgctgggcgcagtgctgttcgcccatgacgaattccaggtggtgatccaggccgtt
gccgagctggcagccgaagccggcaagccaacctgggactggcagccgaaggcggaaaat
accgagctgctcaatgccatccgcagcgagttcggcgaggcgatttcccaggcctacacc
atcatcatcaagcaggaccgctatgcgcgcctgggcgagttgcgcgagcagatcgtcgcc
cgcttcgccaatgaagaaggccagccttccgcggccgaagtgaaggatgcgttcggtgag
atcgaataccgcaccgtgcgcgagaacatcgtcaacggcaagccccgtatcgatggtcgc
gatacccgcaccgtgcgtggcctgaacatcgaagtcggcgtgctcggcaagacccacggt
tccgccctgttcacccgtggcgaaacccaggcgctggtcgtagccaccctcggcaccgcc
cgcgatgcgcagatcctcgacaccctcgaaggtgagaagaaagaccccttcctgctgcac
tacaacttcccgccctattcggtgggtgagtgcggtcgcatgggcgccactggtcgtcgc
gagatcggtcatggtcgcctggcccgtcgtggtgtcgccgccatgctgccgagcgccgac
gagttcccgtacaccatccgcgttgtgtcggaaatcaccgaatccaacggttccagctcg
atggcttccgtctgcggcgcttccctggccctgatggacgccggtgtgccgatgaaggcg
ccggtggccggtatcgccatgggtctggtcaaggaaggcgagaagttcgccgtactgacc
gacatcctcggtgacgaagatcacctgggcgacatggacttcaaggtggccggtaccgcc
aaaggcgtcactgcgctgcagatggacatcaagatccagggtatcaccgaggagatcatg
gagcaggcgctggagcaggcgctggaagcgcgcctgaacatcctcggccagatgaaccag
gtgatcgcccagtcgcgcagcgagctgtcggccaacgccccgaccatgctggcgatgaag
atcgaccaggacaagatccgcgacgtgatcggcaagggtggcgcgaccatccgtggcatc
tgcgaagaaaccaaggcctcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaggcggccgaggctgccaagcagcgcgtgctggccatcactgcagaggcc
gagatcggcaagatctacgtcggcaaggtggagcgcatcgtcgacttcggcgccttcgtc
aacatcctgcccggcaaggacggcctggtgcacatctcgatgctgagcgatcagcgcgtc
gaaaaggtcaccgatgttctcaaggaaggccaggaggtcgaagtgctggtgctggacgtg
gacaaccgcggccgcatcaagctgtcgatcaaggacgtggcggcggcgaaagcctccggc
gcctga
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integrated database retrieval system
