Thiopseudomonas alkaliphila: AKN87_00250
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Entry
AKN87_00250 CDS
T04152
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbb03036
]
AKN87_00250
Chromosome and associated proteins [BR:
pbb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
AKN87_00250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SMC_hinge
Motif
Other DBs
NCBI-ProteinID:
AKX43717
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Position
51668..55162
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AA seq
1164 aa
AA seq
DB search
MRLKCIRLAGFKSFVDPTTAYFPSNMTAVVGPNGCGKSNVIDAVRWVLGESSAKNLRGES
MTDVIFNGSNTRKPISQASIELVFDNSAGGLLGEYAAYSEISVRRLVSRDGQSSYFLNGT
KCRRRDITDIFLGTGLGPRSYAIIEQGMISRLVEAKPEELRIFLEEAAGISKYKERRRET
ENRIRRTEENLARLTDLRQELGRQVERLERQAADAKTYTELKSQERQLKAQLMALRWRAL
DAEVRQRDQALQLQELELERLISEQRQADALIEQYRQQHFEQNEAFNRQQALFYSVGAEV
AKLEQSINHHHQQQRKLQQQALEAEQQQRSLAEELAQDQLTLESLIAELAELEPEARLQQ
EQVAAFRLELETLEAEQLQWQQSWEVFTEQHAAALHQADLEQNRIQQTEVQLSRYAERLR
RHQDEAQLLNIHQQQQALSENVAQQTLLAEQQAELALSLEGVQEQLSQQHARIEQSLQLV
EQHSAAQQRLIGQQASLQALQEAALGTDNQQLVQWLQQQQLQNLASLAEQLTVEPGWEAI
LEALLGAQLQSFCSTSLPYAAFASAPPESVSFITPSTASLPAAEDELLAKVKCAYDLSPW
LAGIKTADSFAQAQAQLATLQAGESIVTAEGYWLGAGFIRFFAADAQQAGVLQRAQQLQA
LELQLQQLTQELARAKQALQQQQALLVDLEQQRQQLLATQQGLANEQAQQQAQSSILQAR
VEQLQQRQQQLQQEMGELEENISLEQEQLAEARLTLEQAIEQMADHTQHKQKLEHTREQL
TAQLRMLRQQAQQAQHSQHQLELQLNTLRAQRQSTEQALARTAQQVARAGSRHQQLQLEL
AEQGDPVTELQALLEEQLAERLLADEGLREVRQQLEQITAQLRQQEQSRLTFEQRVQQLR
DSVQQAQLAGHELMVRRDNQQEQVQDSGFALAALLELLPASAVISDWEQELQQVAEAIER
LGAINLAAIEEFQLQSARKAYLDAQDADLNEALHTLQTVIEKIDQETRQRFRDTFERVNS
GLQRLFPKVFGGGNASLELTGDDLLSTGVAIMAQPPGKKNSTIHLLSGGEKALTALSLVF
AIFQLNPAPFCMLDEVDAPLDDANVGRYANLVKEMSDSVQFIYITHNKIAMEKADQLLGV
TMHEPGCSRLVAVNVEEAAALAES
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctcaagtgtattcgtttagcgggttttaaatcctttgtggatccaaccaccgct
tactttccaagtaatatgaccgcggtggtcggcccgaacggatgcggtaagtctaatgtg
attgacgcagtgcgctgggtacttggtgaaagctcggcaaaaaatttacgcggtgaatcg
atgaccgatgtcatcttcaatggctccaatacccgtaaacctatctctcaagccagtatc
gaactggtgtttgataacagtgccggcggtctgttaggcgagtacgcagcctatagcgaa
atttcggtacgccgcttggtgagtcgcgatgggcaaagcagctactttcttaatggcact
aagtgtcggcgccgagatattaccgatattttcttaggcaccggtttaggcccgcgcagt
tacgccattatcgagcaaggaatgatttcgcgcttggtggaggccaagccagaagagctg
cggatttttttagaagaagccgcaggaatttctaaatataaagagcgtcggcgcgagacc
gaaaatcgtattcgacgcactgaagaaaacttagcgcgtttgactgatttacgccaagag
ttggggcgtcaagtcgagcgtttagagcgtcaagccgcggacgctaagacttataccgaa
ttaaaaagccaagaacggcagctcaaggcgcaattaatggcgctgcgttggcgggcatta
gatgccgaagtgcggcaacgtgatcaggcgttgcagttacaagagctggaattagagcgc
ttgatcagtgagcagcgccaagccgatgcactgattgagcagtatcgtcagcagcacttt
gagcaaaacgaggcctttaatcgacagcaagccttgttttatagtgttggcgctgaagtg
gccaagcttgagcaaagcattaaccatcatcatcagcaacaacgtaagttgcagcaacaa
gccttagaggctgaacagcaacagcgcagcttggctgaagagttagcacaagatcagctt
accttagaaagcttaattgctgagctggctgagttagaacctgaagctcgtttacagcaa
gagcaggtagccgcttttcgcttagaactggagacgttagaggccgagcagctgcaatgg
caacaaagctgggaggtgtttactgagcagcatgcagcggcgctccatcaggcagatctt
gaacaaaaccgcattcagcaaactgaagtgcagctgagtcgttatgctgaacgcttacgg
cgtcatcaagatgaagcgcaactactcaatattcatcagcaacaacaggccctaagcgag
aatgtagcgcagcaaacgctacttgctgagcagcaagccgagctggcactcagtctagaa
ggggtgcaggagcagctgagccaacaacatgcacgaattgagcagagtctgcagttagtc
gagcagcacagcgccgctcagcagcgcttgattggacagcaggcttcattacaagcctta
caagaagccgctttaggcactgataatcagcaattagtccagtggttgcagcaacaacag
ttgcaaaatctagccagcttggctgagcaattaactgttgaaccgggctgggaagcaata
ttagaggcgttattaggcgctcagctgcaaagcttttgtagtacatcgctaccttatgct
gcctttgctagtgcaccgccggagagcgtcagtttcattacgccaagcaccgcttccctg
cctgcagcagaagatgagctgctggcaaaagtgaagtgtgcctatgatttaagtccttgg
ctggcagggattaaaacggctgatagtttcgcccaagctcaagcgcagttggcaacgctg
caggcgggagagtcaatcgtcactgctgaaggctattggttaggcgccggctttatacgt
ttttttgccgcagatgcccagcaagcgggagtgttacagcgtgctcagcagttgcaagca
ttagaattacagctgcagcagcttacccaagagctggcccgggccaagcaagccttgcaa
cagcaacaggcgctgttagtggatttagagcagcagcggcaacagttattagctacgcaa
cagggattggcgaacgagcaggcgcagcagcaggcacaaagtagtattttgcaggctcga
gtggagcagttgcagcaacgtcagcagcagttacagcaggaaatgggtgagttagaggaa
aacattagccttgagcaagagcaactggccgaggcaaggctcacattggagcaggccatt
gagcagatggctgatcacacccagcacaaacaaaagctagagcatacccgcgagcagtta
accgcgcaactgcggatgttgcgtcaacaggcacagcaggcgcagcacagccagcatcag
cttgaattgcaattaaacaccttgcgtgctcagcgtcagtcaactgagcaagccttagcc
cgtactgcgcaacaggtggcgcgagccggtagccggcatcagcaattacagctcgagtta
gctgagcaaggagatccggtaacagagctgcaagccctacttgaagagcagcttgccgag
cgcttgctggccgatgaaggcttgcgcgaagtgcggcagcagttagagcagataaccgcg
caattgcgccaacaagaacagtcacgcttaacttttgagcagcgggtgcagcagttgcgt
gacagtgtgcaacaggctcaattagcagggcatgagttgatggtgcggcgggataatcag
caagagcaggttcaagacagtggttttgctctagccgcgttacttgagttgctccccgca
agcgcagtgatcagtgattgggaacaagagctgcaacaggtggccgaagccattgagcgc
ttaggtgcaattaacttagccgccattgaagagtttcagttgcagtctgcgcgcaaagct
tatctggatgcccaagatgccgacctgaacgaagcattgcatacgctacaaacggtgatt
gagaaaattgatcaggaaacgcgtcagcgttttcgcgacacctttgagcgagtaaatagt
ggtttgcagcgtttatttcctaaggtgtttggtggtggaaatgccagcttagagctaacc
ggtgatgatttattaagcaccggagtggcgattatggcccagccaccaggcaagaaaaac
agcaccattcacttattgtcgggcggtgaaaaagcgctcaccgcgttatctttagtgttt
gcgatttttcaattaaatcctgcaccattttgcatgctcgatgaggtggatgcgccctta
gatgacgctaacgtggggcgctatgccaatctagttaaagaaatgtcagatagcgtgcag
tttatttatatcacccacaataagatcgctatggaaaaagccgatcagttattaggggtc
actatgcatgagccaggttgctctcgtttggttgcggttaacgtagaagaggctgctgcg
ctggcagagagctag
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