Thiopseudomonas alkaliphila: AKN87_00515
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Entry
AKN87_00515 CDS
T04152
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbb03019
]
AKN87_00515
Messenger RNA biogenesis [BR:
pbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AKN87_00515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_29
mTERF
SKI
AAA_18
AAA_16
DAP3
ABC_tran
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AKX43762
LinkDB
All DBs
Position
complement(110234..111100)
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AA seq
288 aa
AA seq
DB search
MQLVIVSGRSGSGKSTALAVLEDNNFYCIDNLPAELLLNLVENTLLANDPATQQVAVSID
ARNLPHQLEQLPQLLAQIKQRNIDCDVLYLDASNASLLKRFSETRRRHPLTKGSLSLAEA
IEAEKQMLAPIAQLADLTIDTTQLNLYQLADCIKLRLLDKPEPTTSILLESFGFKRGLPI
DADLVFDVRCLPNPYWEPELRAYSGQDSPVQEYFAQQPEVGEMYTDLYAYLSKWLPRIAD
SNRAYVTVAIGCTGGRHRSVYLVDQLAKALDGKLPNLQIRHRDLHAKH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggttattgtcagtggtcgatcgggctcaggaaaaagtacagcgctagcggta
ctagaagacaacaacttttactgcattgacaatctacccgccgagctactgcttaatctg
gtagaaaataccctactggccaatgaccctgccacccaacaggttgcagtgtcaattgac
gcgcgaaacttaccgcatcagttagagcaactgccgcaactcctggcacaaatcaaacaa
cgtaatattgattgcgatgtgctgtacttggatgcgagcaatgccagcttacttaaacgt
ttttctgaaacgcgtcgccgtcatccgctaactaaaggctcactgtcgttagctgaagcg
attgaggcagaaaagcaaatgctagcgcctatcgcgcagctggctgatctaaccattgat
accacccagcttaatctataccaactagccgactgcattaaattgcggttactagataaa
cctgaaccgaccacctcgattttattagagtcttttggctttaaacgaggcttaccgatt
gatgcggacttagtatttgatgtgcgctgtttgcctaacccttactgggaaccagaattg
cgcgcctatagcggccaagactcaccagtacaagaatactttgcccagcagcctgaagta
ggtgaaatgtacaccgatctctacgcttacttaagcaaatggttaccccgcatcgccgat
agtaatcgcgcctatgtcacggtcgccattggctgtacaggtggccgccaccgttcagtt
tatttagtcgatcaattagctaaagcgctggatggtaagctacccaacttacaaattaga
catcgcgatctgcatgcaaagcactaa
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