Thiopseudomonas alkaliphila: AKN87_01995
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Entry
AKN87_01995 CDS
T04152
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb03030
DNA replication
pbb03430
Mismatch repair
pbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKN87_01995
03430 Mismatch repair
AKN87_01995
03440 Homologous recombination
AKN87_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbb03032
]
AKN87_01995
03400 DNA repair and recombination proteins [BR:
pbb03400
]
AKN87_01995
Enzymes [BR:
pbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKN87_01995
DNA replication proteins [BR:
pbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKN87_01995
DNA repair and recombination proteins [BR:
pbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKN87_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKX44013
UniProt:
A0A0K1XB93
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All DBs
Position
403986..404702
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AA seq
238 aa
AA seq
DB search
MRYIVLDTETTGMPVHEGHRIVEIGCVELEDRTLTGRHFHVYLQPDRDSDPEALRVHGIT
SEFLQDKPRFAEVADDFYQFIQGACLVIHNAAFDVGFIENEFRLIGQQDRTRITDYCEVL
DTLELAKQLHPGQRNNLDALCRRYDVDNSNRELHGALLDAQILADVYLAMTGGQTDLMLA
SDEPEPYAVDQSLTALTPISRDRPALKIIRATAAELEAHEQRLADISKAVKGPALWQQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagatacatcgtacttgatactgaaaccacgggtatgcccgtgcatgaggggcaccga
atcgttgaaattggctgcgttgagttagaggatcgcaccctaactgggcggcactttcat
gtttatttgcagcctgatcgcgacagtgatcctgaggcgttacgggtgcatggaattacc
agtgagttcttacaagataagccacgatttgctgaagttgccgatgatttttatcagttt
attcagggtgcctgcttagtcattcataacgcggcttttgacgtaggctttattgagaac
gaatttaggttgattggccagcaggatcgcacgcggatcacggactattgcgaagtgctg
gataccttagagttagcaaagcagctgcatccaggtcagcgcaacaacttagatgctttg
tgtcgccgttatgatgtcgataactctaatcgggagttgcacggggcgctgttagatgcg
cagattctcgctgatgtttatctagcaatgactggggggcaaaccgatttaatgctagcc
agtgatgagccagagccctatgccgttgatcagtcattaacagcacttacgcccatttca
cgtgatcgtccagccttaaaaattattcgtgcgactgccgcagagcttgaggcccatgag
cagcgtttagctgatatcagtaaggcagtgaaggggcctgcgttatggcagcaatag
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