Thiopseudomonas alkaliphila: AKN87_02280
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Entry
AKN87_02280 CDS
T04152
Name
(GenBank) isopropylmalate isomerase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb00290
Valine, leucine and isoleucine biosynthesis
pbb00660
C5-Branched dibasic acid metabolism
pbb01100
Metabolic pathways
pbb01110
Biosynthesis of secondary metabolites
pbb01210
2-Oxocarboxylic acid metabolism
pbb01230
Biosynthesis of amino acids
Module
pbb_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
AKN87_02280
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
AKN87_02280
Enzymes [BR:
pbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
AKN87_02280
4.2.1.35 (R)-2-methylmalate dehydratase
AKN87_02280
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AKX44061
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All DBs
Position
457806..459230
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AA seq
474 aa
AA seq
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MTGKTLYDKLWDMHEVKRRDDGSSLIYIDRHILHEVTSPQAFEGLRLAGRQPWRIDANIA
TPDHNVPTTKKEREGGIAAIADETSRIQVQTLDANCDEFGIVEFKMNDIRQGIVHVIGPE
QGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMQVRVEGQL
GAGVTAKDVVLAIIGKIGTAGGTGYAIEFAGSAIRDLSMEGRMTICNMSIEAGARVGLVA
VDEKTIDYVKGRPYSPKGQDWEQAVTVWQGLVSDADAQFDKVVELRAEDIKPQVSWGTSP
EMVLPVDANVPDPAQEADPVKRDSIQRALNYMGLRANQAITDIKVDRVFIGSCTNSRIED
LRAAAEAAKGRKVAANVLQAMVVPGSGLVKQQAEAEGLDKIFIEAGFEWREPGCSMCLAM
NPDKLGSGEHCASTSNRNFEGRQGNGGRTHLVSPAMAAAAAVQGHFVDVRELLN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaagacactgtatgacaagttatgggatatgcacgaagtaaagcgtcgtgat
gacggttcttcgttaatttacattgatcgtcatattctgcatgaagtgacatcaccccag
gcatttgaggggttacgtcttgcaggacgtcagccatggcgtattgatgccaacattgct
actcctgatcacaacgtaccaaccacgaaaaaagagcgtgagggtggaattgcagccatt
gctgatgaaacctcacgtattcaggtacaaacattagatgctaactgcgatgagtttggc
attgttgagtttaagatgaatgatatccgtcaagggattgttcacgtaattgggccagag
cagggtgccaccttgccaggaatgaccgtggtttgcggtgactcccatacctctactcat
ggtgcttttggtgccttagctcatggcattggtacttcagaagttgagcatgtgttggct
actcagtgtttagtggccaaaaaaatgaaaaatatgcaagtacgggttgaaggccagtta
ggagcaggggtgactgccaaagacgtcgtgttggcgatcattggtaaaattggtaccgca
gggggtaccggttatgccattgagtttgccggtagtgcgatccgtgatttatcgatggaa
ggtcggatgaccatttgtaacatgtcgattgaagccggtgcacgtgttggtttagtcgct
gtcgacgagaaaactattgattatgtgaaaggtcgtccgtactcacctaaggggcaggat
tgggagcaagcggttaccgtttggcaagggttagtttcagatgcagatgctcaatttgac
aaagtcgttgaactgcgtgctgaagacattaaaccacaagtgagctggggcacctcgcca
gagatggtcttgccagtggatgctaatgtacctgatcccgctcaagaagccgatccggtg
aagcgtgactcgattcagcgagccttaaattatatggggctgagagccaatcaagcgatt
accgacatcaaagttgaccgggtatttattggttcttgcaccaactcacggattgaagac
ttgcgggctgcagctgaggcagctaaagggcgcaaagtagcagctaacgtgcttcaggcc
atggtagtaccaggttctggactagttaagcagcaagccgaagccgaaggtttagataaa
atttttattgaggcaggctttgagtggcgtgagcctggttgctctatgtgcttagcgatg
aaccctgataaattaggcagtggtgagcactgtgcctcgacctctaaccgtaactttgaa
ggacgccaaggcaatggcggacgcacccatttagtcagtccagcgatggctgcagcggcc
gcagttcaaggtcattttgttgacgtgcgtgaattattaaattaa
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