Thiopseudomonas alkaliphila: AKN87_05145
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Entry
AKN87_05145 CDS
T04152
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbb01011
]
AKN87_05145
Enzymes [BR:
pbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AKN87_05145
Peptidoglycan biosynthesis and degradation proteins [BR:
pbb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AKN87_05145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
HTH_Tnp_1
LysM_OapA
LysM2_CERK1_LYK3_4_5
HTH_28
HTH_Tnp_ISL3
HTH_23
DUF5018-rel
Motif
Other DBs
NCBI-ProteinID:
AKX44556
UniProt:
A0A0K1XCD3
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All DBs
Position
1061769..1063334
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AA seq
521 aa
AA seq
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MSIFRSLLHPSRSLIVFSSVIASLISGCASKHNTSDEFAAFQPVTTQSSATAELNRAKKQ
AVMRKQAEQDVWQIIRQGYQFADDVQTNPRIEQQRLWFAARTNSIETMAQRSTPYLHYIV
DHLQKRKMPLELALLPMIESAYDPTAYSHSHASGLWQFIPSTGKYFNLKQTSWYDERRDL
TASTLAALDYLEYLSNMFEGDWLLALASYNAGEGTVSRAMKRNRELGLPTDYWNLSLPKE
TQYYVPKFLAVAQIVSSPQAYNVKLAPVANQPYFATIKIEHALDLDRVAMLANIDRTELS
QLNAAHMQGVTVDGPKVIRVPATKVSTLQERLAKLRSQDLMRWQQHRVTSGETLHSIAQQ
HKVSKEALKYLNKLNSDQVTVGQQLTIPSQHHFALAQKTEQLSRTNLRAKAGATTAAANV
RYQVRRGDTLSSIARRHGVSINQLKQWNRIAGNNIQVGQTLALRQATRSAVAKKPTYYRV
RSGDSLSLIARRHNVSLKQLQAWNPKSSSAIRPGQQLAIYR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttttcgctctttactgcatccctcacgctcattgattgtattctcatcagtg
attgccagtttaatttctggttgtgccagtaagcacaataccagcgatgagtttgctgct
tttcaaccagttaccactcaatcttctgccactgctgaattaaatcgagcaaaaaaacag
gctgtaatgcgcaagcaagctgaacaggatgtttggcaaattattcgccaaggctaccag
tttgcagatgatgtccaaaccaatcctcgcattgaacagcagcgtttatggtttgccgct
cgcaccaactccattgaaaccatggcgcaacgtagcacgccctatttgcattatattgtc
gatcacttacaaaaacgcaagatgccgctagagcttgctctgctgccaatgattgaaagt
gcttatgaccctaccgcttattcccactcccatgcttcaggcttgtggcaatttatcccc
tccaccggtaaatatttcaacctcaaacaaacctcatggtatgacgagcgacgtgaccta
acagcctccaccttagcggcgctggattatctggaatacctaagtaacatgtttgaaggc
gattggctcttagctttggcctcttataatgcgggcgaaggtactgttagccgagcgatg
aaacgtaatcgcgagctggggttaccgaccgattactggaacctgtcactgcctaaagaa
actcaatactacgtgcctaagtttctcgctgtcgcacaaatcgtatctagcccacaagcc
tataacgttaagctagctcctgttgccaatcagccctactttgccaccattaaaattgag
cacgccttggatttagaccgagtagcaatgttggcaaatattgatcgtactgaactgagc
caactgaatgcggcacatatgcagggcgtgactgttgatggccctaaagtgatccgggtc
cctgccaccaaagttagcaccttgcaagagcgcctcgccaaactgcgaagccaagactta
atgcgctggcagcaacaccgcgtcaccagcggcgaaactctacacagcattgctcaacag
cacaaagtttcaaaagaagcactcaagtatctgaacaagctaaactcggatcaggtcacc
gttggtcagcagttaaccattccttcccagcatcactttgctttagcacaaaaaactgaa
cagctcagccgcaccaacttgcgcgctaaagcaggagcgacaactgctgctgccaacgtt
cgttatcaagtccgccgcggcgataccctgtctagcatcgcccgccggcatggcgtcagc
attaatcagctaaagcaatggaaccgaatcgctggcaataacattcaagttggccaaacc
cttgctttacgtcaggctacccgcagcgcagtggctaaaaaacccacttactaccgtgta
cgtagcggtgactccttgtcactgatcgccagacgacataatgttagccttaaacaatta
caggcttggaacccgaaaagctcaagtgcgattcgcccaggccaacaactggctatttat
cgttaa
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