Thiopseudomonas alkaliphila: AKN87_05415
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Entry
AKN87_05415 CDS
T04152
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbb03000
]
AKN87_05415
03036 Chromosome and associated proteins [BR:
pbb03036
]
AKN87_05415
Transcription factors [BR:
pbb03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
AKN87_05415
Chromosome and associated proteins [BR:
pbb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AKN87_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HTH_Crp_2
MarR_2
HTH_IclR
Fe_dep_repress
HTH_34
HTH_1
HTH_11
DUF7343
HTH_20
Rrf2
HTH_5
HTH_36
HemN_C
Put_DNA-bind_N
NirdL-like_HTH
Crp
Phage_rep_O
TrmB
DnaD_N
Xre-like-HTH
LexA_DNA_bind
BTRD1
Motif
Other DBs
NCBI-ProteinID:
AKX44598
UniProt:
A0A0K1XCW1
LinkDB
All DBs
Position
1126678..1127160
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AA seq
160 aa
AA seq
DB search
MENLDRFDLRILAELQKDSRISNQELAERIGLSPSPCSRRVKQLEDEGYITKQVALLDRK
RLGLTLTAYILIGMDRHTPERFENFQNNILQWSEVQECSLITGMDADYQLKVVVPDMEHY
QLFLLNKLTRIEGVTSVRSSFVLNHVSLSTSLPLDHLRKF
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcttgatcgctttgacttacgcattcttgccgaactgcaaaaagactcgcgg
atctccaaccaagaactcgctgagcgcattggcttatcaccctccccttgctcacgccgc
gtcaaacaactagaagatgaaggctatattactaaacaagtcgctttactcgatcgtaag
cgcctaggccttacgctaacagcctatattttgattggaatggatcgtcatacccctgaa
cgctttgaaaactttcaaaataatattttgcagtggtcagaagtccaagaatgcagctta
attactggcatggatgcagactatcaattgaaggtggtagtacctgatatggaacactac
cagttatttttgcttaataaactaacgcgcattgaaggtgtcaccagtgtacgctctagc
tttgtgcttaatcatgtctcactcagcacaagcttacctttagatcatttacgtaagttt
taa
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