Thiopseudomonas alkaliphila: AKN87_05570
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Entry
AKN87_05570 CDS
T04152
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKN87_05570 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbb03019
]
AKN87_05570 (groEL)
03110 Chaperones and folding catalysts [BR:
pbb03110
]
AKN87_05570 (groEL)
03029 Mitochondrial biogenesis [BR:
pbb03029
]
AKN87_05570 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbb04147
]
AKN87_05570 (groEL)
Enzymes [BR:
pbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AKN87_05570 (groEL)
Messenger RNA biogenesis [BR:
pbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AKN87_05570 (groEL)
Chaperones and folding catalysts [BR:
pbb03110
]
Heat shock proteins
HSP60 / Chaperonin
AKN87_05570 (groEL)
Mitochondrial biogenesis [BR:
pbb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AKN87_05570 (groEL)
Exosome [BR:
pbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AKN87_05570 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AKN87_05570 (groEL)
Exosomal proteins of breast cancer cells
AKN87_05570 (groEL)
Exosomal proteins of colorectal cancer cells
AKN87_05570 (groEL)
Exosomal proteins of bladder cancer cells
AKN87_05570 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKX44628
UniProt:
A0A0K1XD59
LinkDB
All DBs
Position
complement(1162339..1163979)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFGDAGRIKMLAGVNVLADAVKATLGPKGRNVVLERSFGAPLITKDGVSVAKEI
ELKDRFENMGAQLVKDVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATVAIVEQIKSLAKPCADSKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEDPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
VSEEVGLSLDTTTLEHLGQAKRVVINKDDTTVIDGSGAQADIEARVAQIRKQIDETSSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALLAIEGLTGDNEDQNVGIALLRRAVEAPLRQIVSNAGDEPSVVVDKVKNGEGNFGFNA
ASGEYGDMIAMGILDPAKVTRSALQAAASIGGLMITTEAMIADIKEEGAMPAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagtgaaatttggcgacgctggccgcattaaaatgctagcaggtgtt
aacgtactggcagatgccgttaaagcaacgcttggccctaagggtcgtaacgtggtttta
gagcgcagttttggtgctccgttaatcactaaagatggtgtttcagtagcgaaagaaatc
gaactgaaagatcgctttgaaaacatgggtgcgcaactggttaaagacgttgcttctaaa
gcgaacgatgaagcgggtgacggtaccactactgctacagtactggctcaagccattgtt
aacgaaggcttaaaagcagttgcagcgggtatgaacccaatggacttaaagcgcggtatt
gataaagcaaccgttgctattgttgagcaaattaaaagcttagctaagccttgcgctgac
tctaaagccattgctcaagtcggtactatctctgcaaactctgactcctcaatcggtgac
attattgccgaagcgatggaaaaagtaggcaaagaaggtgttattactgttgaagaaggt
tccggtttagagaacgaactgtctgtggttgaaggtatgcagtttgatcgtggctacctg
tcgccttacttcatcaacaaacctgacaccatggtggcagagttagaagatcctttactg
ttattagtggataagaagatctctaacatccgtgagttactgccagtacttgaagctgta
gcgaaagcaggtcgtccactgttaattattgctgaagatgttgaaggtgaagccttagcg
actttagtagtgaacaacatgcgcggcattgttaaggtggcagcggttaaagcgcctggc
ttcggtgatcgccgtaaagctatgctgcaagacattgctatcttaactggcggtaccgta
gtttctgaagaagtgggtctaagcttagacaccacaacattagagcacttaggtcaagct
aagcgtgttgtgatcaacaaagacgacaccactgtgattgatggctcaggtgcacaagcg
gatatcgaagcccgtgtggcacagattcgtaagcaaatcgatgaaacttcatctgactac
gacaaagagaaactgcaagagcgtctcgctaaattagccggcggtgtggcagtgatcaaa
gtgggtgcagcaactgaagttgaaatgaaagagaaaaaagcccgcgttgaagatgcgtta
cacgctactcgcgctgcggttgaagaaggtgtagtgcctggtggtggtgtggctttagta
cgcgcactgttagccattgaaggcctaactggcgacaacgaagatcagaacgtaggaatt
gctttactgcgccgtgcagttgaagcaccgttacgtcagatcgtttctaacgccggtgac
gagccaagcgtggtagttgataaagttaaaaacggcgaaggtaacttcggctttaacgct
gccagcggtgagtacggcgatatgatcgctatgggtatccttgacccagctaaagtaact
cgctctgcgctgcaagcagccgcttctatcggtggtttaatgatcactactgaagctatg
attgccgacattaaagaagaaggcgcaatgccagctatgcctgatatgggcggcatgggt
ggtatgggcggaatgatgtaa
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