Thiopseudomonas alkaliphila: AKN87_05915
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Entry
AKN87_05915 CDS
T04152
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbb03400
]
AKN87_05915
DNA repair and recombination proteins [BR:
pbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AKN87_05915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
AAA
GvpD_P-loop
nSTAND3
SLFN-g3_helicase
Rad51
RecA
AAA_14
DUF7125
NTPase_1
AAA_24
MCM
NACHT
AAA_5
ABC_tran
PAXNEB
AAA_19
AAA_29
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AKX44693
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Position
complement(1227384..1228754)
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AA seq
456 aa
AA seq
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MAKAKRIYGCTECGATFPKWAGQCGECGQWNTLIETVIESSRATATGRSGGWAGQQAQLK
TLAEVSIEEIPRFSTCSSELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCKMAQQVS
ALYVTGEESQQQVAMRGRRLDLPLDRLKVMTETCIESIIEVARREQPRVMVIDSIQTIFT
ENLQSAPGGVSQVRESAALLVRYAKQNNTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYFE
GESDGRLRMLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVSGSVVMATW
EGSRPMLVEVQALVDSSHLGNPRRVSVGLDHNRLSMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEIGLSGEIRPVPSGQERLKEAAKHGF
KRAIVPKGNAPREMPKGLQVIAVTRLEQALDALFDQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcaaaacgcatctatggttgtactgagtgtggggcaacctttcctaagtgg
gcaggtcagtgtggtgaatgcggtcagtggaataccttaattgaaacggtcatcgagagt
agtcgcgccacagccactggccgtagtggggggtgggctgggcagcaggcacaactgaag
accttagctgaggtcagtattgaggaaatcccacgttttagtacctgttccagtgagcta
gatcgcgtgcttggcggtggcctagttgatggttcagtggttcttattggcggtgaccct
ggcattggtaaatcaacaatcctattgcaaaccctttgtaaaatggcgcaacaggtttca
gcattgtatgtcactggggaagaatcgcagcagcaagtggccatgcgcggtcggcgttta
gacttacctttagataggttgaaagtgatgaccgaaacgtgtattgagagcatcatcgag
gtggcgcgccgcgagcagccacgggtgatggtgattgactcgattcaaacaatttttacc
gaaaacctgcaatcggccccaggtggggtttctcaggtgcgagaaagtgcagctttattg
gtacgttatgccaagcaaaataatactgcgatttttttagttggtcatgtcactaaagaa
ggctcgcttgcaggcccgcgagtgctagagcatatggtggatacggtgctgtactttgag
ggtgagtctgatggacgcttgcgtatgttgcgggcggttaaaaatcgctttggcgcagtg
aatgagcttggcgtgtttggcatgactgataaaggattaaaagaagtctctaatccttcg
gctattttccttacgcgcgcccaagaagaagtctctggtagcgtagtcatggcaacttgg
gaaggctcaaggccgatgctagttgaggtgcaggctttagtggatagtagtcacctaggt
aatccacggcgggtgagtgtcggcttggatcataaccgcttatctatgttgttagccgta
ctgcatcgacacggtgggattccaacccatgatcaagacgtatttttaaatgtggtgggt
ggcgttaaggtgctggaaacagcctcagatctcgcattaatggccgctgtgatgtcgagt
ttacgcaaccggccgttaccccatgatttgttggtctttggtgagattggcttatcaggt
gagattcgcccagtgcccagcggtcaagagcgtttaaaagaggcagctaaacatggtttt
aagcgcgccatagtgcctaaaggcaatgcgccccgtgaaatgccgaagggtttgcaggtc
attgcagtcactcgattggagcaagcattagatgcattatttgatcaataa
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