Thiopseudomonas alkaliphila: AKN87_06405
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Entry
AKN87_06405 CDS
T04152
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AKN87_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbb03400
]
AKN87_06405
Enzymes [BR:
pbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
AKN87_06405
DNA repair and recombination proteins [BR:
pbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AKN87_06405
RecFOR pathway proteins
AKN87_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AKX44772
UniProt:
A0A0K1XDM5
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All DBs
Position
complement(1318245..1318769)
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AA seq
174 aa
AA seq
DB search
MTLILGIDPGSRITGYGVIRDTGKTCEYIASGCIRTGSGELSERLKAVYLGISQVIELYQ
PELVGIEQVFMAKNPDSALKLGQARGVAIVAAAQSGLPVSEYSATQVKSAVAGSGRAAKE
QVLMMVMHLLKLTKKPQIDASDALAVALCHAHHRQTLTPHGLASAKRRAGRLRY
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgacattaattttagggatcgatccaggttcacgcattaccggttatggggtaattcgt
gatacgggtaaaacctgcgagtacattgcttcaggttgtattcgaaccggcagtggcgaa
ctgtctgaacgactgaaagcggtttatcttggtattagccaagtgattgagttgtatcag
cccgagttggtggggattgagcaagtgtttatggcaaaaaatcccgactctgcgctcaag
cttgggcaagcgcgtggcgtggcgattgtggccgctgcgcagtcagggttgccggtcagt
gagtacagtgccacccaagttaaatccgccgtagctggcagtggccgagcggccaaagag
caggtgttgatgatggtgatgcatttgcttaagttaaccaaaaagccgcaaattgatgct
tctgatgctttggctgtggccctgtgtcatgcccatcaccgtcaaactttaaccccccat
gggttagccagcgctaagcgccgggctggccgtttacgttattag
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