Thiopseudomonas alkaliphila: AKN87_06745
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Entry
AKN87_06745 CDS
T04152
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbb03019
]
AKN87_06745
03016 Transfer RNA biogenesis [BR:
pbb03016
]
AKN87_06745
Enzymes [BR:
pbb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
AKN87_06745
Messenger RNA biogenesis [BR:
pbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AKN87_06745
Transfer RNA biogenesis [BR:
pbb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AKN87_06745
Prokaryotic type
AKN87_06745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AKX45842
LinkDB
All DBs
Position
1389731..1390066
Genome browser
AA seq
111 aa
AA seq
DB search
MIGLALLLLLAWLQLEPSNSKQTQYSQELRQTLALIQQGGPYPYRQDNSLFHNREKRLPL
KPRGYYREYTVPTPNLKHRGAKRVVTGGQPPEVYYYTEDHYQSFIQLKVQP
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
attatcggtctagctttgctcttactgctggcttggctgcagctagagcctagcaattca
aaacaaacccaatactcacaggagcttaggcaaaccctcgcgcttattcaacaaggtggc
ccttacccttatcggcaagataatagcctgtttcataatcgcgaaaaacgcttacctctc
aagccgcgcggctactaccgagaatacacagttcctacgcccaatctcaaacatcgcggt
gccaaacgtgtagttactggcgggcaaccgccagaagtgtactattacaccgaagatcat
tatcaaagttttattcaattaaaggtgcagccatga
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