Thiopseudomonas alkaliphila: AKN87_08090
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Entry
AKN87_08090 CDS
T04152
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pbb
Thiopseudomonas alkaliphila
Pathway
pbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AKN87_08090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbb03400
]
AKN87_08090
Enzymes [BR:
pbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
AKN87_08090
DNA repair and recombination proteins [BR:
pbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AKN87_08090
Prokaryotic type
AKN87_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
Cdd1
MSC
Motif
Other DBs
NCBI-ProteinID:
AKX45055
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All DBs
Position
1676415..1677479
Genome browser
AA seq
354 aa
AA seq
DB search
MSKGFDFAQAVLAWYDLHGRKHLPWQQEVTPYRVWVSEVMLQQTQVSTVLGYFSRFMQQF
PNVEALAAADEDEVLHLWTGLGYYSRARNLHKTAQLIVTNYAGVFPQTLAELEALPGIGR
STAGAILSLSMQIRAPILDGNVKRVLARFSAQSGYPGQASVAKQLWALAEQLTPQQRVHH
YTQAMMDLGATLCTRSQPDCLACPLHSHCLAYQRGTPTAFPEPKPKKQNPSKHTHMLLFV
NPQQQVLLYRRPSTGLWGGLWSLPELEQLSQLSSFAQRQQLTLLDQGTALPPIKHVFSHF
QLLIQPQLIHVQQHPAVAEADWLWYNPKQAARLGFAAPVKKLLKQTFKQLGETQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaggcttcgactttgcccaagctgttttggcttggtatgacctgcatggacgc
aagcatttaccttggcagcaagaggtaaccccttatcgggtctgggtatctgaggtcatg
ctgcagcagacccaggtcagtacagtgcttggctactttagccgttttatgcagcagttt
cccaatgtagaagcgctggcagcagccgatgaggatgaggtgctacacctgtggacggga
ttaggttactactcgcgcgcgcgcaacttacacaaaaccgctcaattaattgttactaac
tatgctggagtttttccacaaacactggcggaactagaggctttacccggcattggccgc
tccaccgctggcgctattttaagtttaagcatgcaaattcgtgcacccattttagatggc
aatgtaaaacgggtattagcccgctttagtgcacaatctggttatcctggccaagccagc
gtcgccaagcaactgtgggcactggccgaacagctaaccccacagcagcgggtgcatcac
tatacccaagccatgatggatctaggcgctacgctctgcactcgcagccagcctgattgc
ttagcctgcccactacatagccattgtttagcttaccaacggggtacgcccacagcgttt
cctgagcccaagccgaaaaaacaaaatcccagtaagcacacccatatgctgctctttgtt
aatccgcagcaacaagtcttgctttatcgccgcccttcaacagggttatggggcgggcta
tggagcctgccagaattagagcagttatcccagctaagtagctttgctcaacggcagcaa
ctgaccctgttagatcaaggcacagccttgcctcctattaaacatgtgtttagccatttt
cagctgctaattcagccgcagttgattcatgtgcaacagcatccagcagtagccgaagca
gactggctttggtataaccccaagcaagcagctcgtcttggctttgctgcaccggttaaa
aaattgttaaaacaaacctttaaacagcttggagaaactcaatga
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