Thiopseudomonas alkaliphila: AKN87_09140
Help
Entry
AKN87_09140 CDS
T04152
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pbb
Thiopseudomonas alkaliphila
Brite
KEGG Orthology (KO) [BR:
pbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbb03009
]
AKN87_09140
Ribosome biogenesis [BR:
pbb03009
]
Prokaryotic type
ribosomal protein modification factors
AKN87_09140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AKX45231
LinkDB
All DBs
Position
1895474..1897237
Genome browser
AA seq
587 aa
AA seq
DB search
MLTEQTFIAGKDAALETTIERFQQQLQNIGFNIEQASWLNPVPNVWSVHIHDRDCPQCFT
NGKGTTKKAALASALGEFLERLSCNYFFADFYLGEQIANSEFVHYPNERWFELTDNQQLP
AGLLDQRLLDFYQAEQPLQANALIDLQSDNFERGICALPFVRQADQQKVYIPMNIIGNLY
VSNGMSAGNSRDEARVQALSEILERYVKNRVLIDAISLPEIPAAVLARYPLVVEAMQAIE
AQGFPLYAFDASLGGEFPVISVVLFNPSNGTCFASFGAHPDFSVALERTVTELLQGRSLK
QLDVFLPPTFDNDQVADYTNLETHFTDSSGLVSWDLFSQQADYEFVDWSFKGSSTAEEFA
NLLAIVQQQGTDAYIADYQHLGIDACRIIVPGLSEIYEVEDLELANNNMGQDLRELVLNL
ADSDWQEEEYLELIDALTEEGFDDFMPIAELIGVVPTAGSVLAGLRIGELKAMLALAGGD
FAAAMEWTEWTLAFNSSVFSAERQNYYRCLHAFLSFELDGTEREFADYLPAFNRMYGAAV
VQQVQQVVNGELRFAGLETVDNNLTQLPAHQRLLEAYQKLQRAKRSA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgttgactgaacaaacctttattgccggcaaagacgcggctttagaaactaccattgag
cgttttcagcagcagctgcaaaacataggctttaatatcgagcaggcttcatggcttaac
ccggtgcccaatgtctggtcggtgcatattcatgaccgtgattgcccgcagtgctttact
aacggtaaaggcaccactaaaaaagcggcattggcttcggctttaggtgagtttcttgag
cgcttatcttgcaactatttttttgccgatttttatttgggtgagcaaatcgccaacagt
gagtttgtgcattatcccaatgagcgttggtttgaattaaccgataaccaacaattaccc
gcagggctgctggatcagcgtttattagatttttatcaagccgagcagccgttacaagcc
aatgctttgattgatttacagtctgataactttgagcgcggcatttgtgcgctgcccttt
gtgcgtcaggccgatcagcaaaaagtatatattccgatgaatattatcggcaacttgtat
gtatctaatggtatgtcggcgggtaatagtcgtgatgaggcgcgggtgcaagcgctatcg
gagattttggagcgctatgtaaaaaaccgagtattaattgatgccattagcctgccagaa
attccagccgcagtgttagcgcgctatccgctagtagtagaggcgatgcaagcgattgag
gcgcagggttttccgctgtatgcctttgatgcttcgctaggtggcgagtttccggttatt
agtgtggtgttatttaacccaagcaacggcacttgttttgcctcctttggcgcacaccct
gatttttccgtagccttagagcgcaccgtaaccgagttattgcaaggccgtagcctaaag
cagctggatgtgtttttaccaccgacctttgataacgaccaagtagccgattacaccaac
ctagaaactcactttaccgattcaagtggtttagtttcttgggatttatttagtcagcag
gctgattatgagtttgtcgactggagctttaaaggcagtagtactgctgaagagtttgcc
aacttattagcaattgtgcagcagcaaggaactgatgcttatattgccgattatcagcac
ctagggattgacgcttgccgcattattgtgccgggactgtctgaaatttatgaagtggaa
gacttagagttagccaataacaacatggggcaagacttacgtgaactggtgctgaatctt
gcagacagtgattggcaagaagaagagtatttagagttaattgatgccttaaccgaagag
ggttttgatgactttatgccaattgccgagctaatcggtgtagtgcctaccgcaggctcg
gtactggctgggctgcgtattggcgaattaaaagcaatgttggcgctggctggtggtgac
tttgcagccgccatggaatggaccgagtggacactggcctttaatagcagcgtgttttca
gcagagcggcaaaactattaccgttgcctacatgcattccttagttttgagttagacggc
accgagcgcgaatttgcggactacttgcctgcatttaatcgtatgtacggcgccgcggtc
gttcagcaagtacaacaggtagtaaacggcgagttgcgttttgctggcttagaaacagta
gacaacaacttaacccagcttcctgcccaccaacgtttactcgaggcttatcaaaagttg
cagcgagcaaaaagatcagcataa
DBGET
integrated database retrieval system
