KEGG   Thiopseudomonas alkaliphila: AKN87_10220
Entry
AKN87_10220       CDS       T04152                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbb  Thiopseudomonas alkaliphila
Pathway
pbb03030  DNA replication
pbb03430  Mismatch repair
pbb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AKN87_10220
   03430 Mismatch repair
    AKN87_10220
   03440 Homologous recombination
    AKN87_10220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbb03032]
    AKN87_10220
   03400 DNA repair and recombination proteins [BR:pbb03400]
    AKN87_10220
Enzymes [BR:pbb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AKN87_10220
DNA replication proteins [BR:pbb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AKN87_10220
DNA repair and recombination proteins [BR:pbb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AKN87_10220
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: AKX45421
LinkDB
Position
complement(2104983..2105693)
AA seq 236 aa
MSWWNPWRKTQVELSLAKQRRVANLTPGKAIDQTPLKRQRWVIVDLEASGLNTLKDCILS
IGAVAIEQGGIPLGKQFACTLQRADQQVTESVLIHQLAPSKLAKGIAPATALLRFLEFVG
DSPLLAFHADFDQRLLVREAKQLLNYKLEHVFYDLALLAPALSPQLEANSCSLDQCLSHF
KLNILQRHNASADALATAELSLILLHLAEQQGIHTLANWDRLYRGLKQRQQQHFSF
NT seq 711 nt   +upstreamnt  +downstreamnt
gtgagttggtggaatccctggcgcaaaacccaagtcgaactgtcgcttgccaaacagcgg
cgcgtggccaatttgactcctggcaaagccattgaccaaacgccacttaaacgacaacgc
tgggtgattgttgacttagaagccagcggcctcaacaccttaaaagattgtattttatca
attggggcagtagccattgagcaaggtgggattccgttaggcaagcagtttgcctgtact
ctccaacgggctgatcaacaggtaaccgaaagtgtgctaatccaccagttagcgcctagt
aaactcgccaagggtattgctcctgcgactgctttactgcgctttttagagtttgttggc
gatagcccactcttggcttttcatgccgattttgatcagcgtctactcgtacgtgaagct
aaacaactactcaactataagttagaacatgtattttatgatctagcattactcgcgccg
gcgctaagcccgcagctagaagccaactcgtgcagtcttgatcaatgcctaagccacttt
aaactgaatattttacagcgccataatgccagtgccgatgccttagccaccgccgaactc
agcttgattttactccatctagcggagcagcaagggatccacaccctggccaattgggac
cgactgtaccgcggtcttaagcagcgccagcaacaacacttttctttctaa

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