Pseudomonas brassicacearum DF41: CD58_00190
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Entry
CD58_00190 CDS
T03174
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03030
DNA replication
pbc03410
Base excision repair
pbc03420
Nucleotide excision repair
pbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD58_00190
03410 Base excision repair
CD58_00190
03420 Nucleotide excision repair
CD58_00190
03440 Homologous recombination
CD58_00190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbc03032
]
CD58_00190
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_00190
Enzymes [BR:
pbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD58_00190
DNA replication proteins [BR:
pbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CD58_00190
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CD58_00190
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD58_00190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
AHL31415
LinkDB
All DBs
Position
38744..41512
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVATLPIRGAKTLAAKLEEHKEM
ALLSYELATIKTDVPLDVGLDDLQMGAPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI
VEVTEEQPGAAEAQYEVILDQARFDAWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLRALKPLLENPNKLKVGQHAKFETNILANCAIGG
DQSNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGKVLTEIEMPLMPVLARIERQGALV
DANLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELEAVTHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLAYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLTASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcac
gcgctgccaccgctgaccacttccaagggcctgccgaccggcgcggtcaagggcgtgttg
aacatgctcaagagcctgcgcaagcagtatccggacagcccgttcgccgtcgtgttcgac
gccaagggtgggacgtttcgtgatgcgctgtacgccgaatacaaggccaaccgcccgagt
atgcccgacgacatgcgcgtgcagatcgagccgctgcatgccagcgtcaaggccctgggc
ttcccgctgctgtgcgtagacaacgtcgaggccgatgacgtgatcggcacgttggctcgc
agcagcgcggcggccgaccgtccggtggtgatctccaccggtgacaaagacatggcgcaa
ctggtcgacgggcacattaccttggtcaatacgatgaccggtagcgccctggacgtggct
ggcgtgaaggagaagtttggcgtcgctccagagcagatcatcgattacctggcgctgatg
ggcgattcgtccgacaacatccccggcgtaccgggcatcggtccgaagaccgcatccggc
ctgctggtgggcgtcaatggcggcctgaccgagctgtatgcgcaactggacatcgttgcc
accttgccaatccgtggcgccaagaccctggccgccaagctcgaagagcacaaggaaatg
gcgctgctttcctatgagttggcgacgatcaagaccgacgtgcctctggatgtcggtctc
gacgacctgcagatgggtgcgccggatcacgagaaactcgccgagctatacaccctgttg
gaattcaagagctggttcgaagaaaaccagcgcgacgccaagcgtgccggccaggagatc
gtcgaagtcaccgaagaacagcccggtgctgccgaggcccaatatgaggtcatcctcgat
caggcgcgcttcgatgcctggttggccaaactcgacaaagcgccgctgtttgccttcgtc
accgaaaccaacggcggcgatgcccagcattcgcaactggtgggattgtcgttcgccgtt
gccccgtttgaagcggcctacatcccactgactcattcctacatgggcgtgccggagcaa
ttggaccgcgacacagtgctcagggccctcaagccgctgctggaaaacccgaacaagctc
aaggttggccagcacgccaagtttgaaaccaacatcctggccaactgcgccatcggcggt
gatcagagcaacggcatcctggttcaaggcatcgctttcgacaccatgctggagtcctat
gtgctggactccaccgcgacccgccacgacatggacagcctggcgctcaagtacctgggc
caaagcaagaccgatttccaggacatcgctggcaaaggcgtcaaacagctgacttttgac
cagatctccctggaactggctggcccttacgccgccgaagacgcggatgtgacgttccgt
ctgcaccaggcactacaggaaaaactggccgccacgccaagcctgggcaaagtgctcacc
gaaatcgaaatgccgctgatgccggtcctggcgcgcatcgaacgccagggtgcgctggtc
gatgccaacctgctgggcgtgcagagtgtcgagttgggcgagaagttggtggcgctggag
cgtgaggcgtttgccatcgccggtgaagaattcaacctgggctcgccgaagcaattgggc
gtgatcctctacgaaaaactcggcttgccggtgctcagcaagaccgccaagggccaggcg
tctaccgccgaagcggtgctcgccgagctggcggagcaggattaccccctgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgatcgcctgccggag
cagatcaacagccgcaccggtcgcgtgcataccaattaccagcaggccgtcgccgcgacc
gggcgcctgtcctccatcgacccgaacctgcagaacattccgattcgcactgccgaaggc
cggcggattcgccaggcattcgtcgcgcccaagggctacaagctgttggcggcggactac
tcgcagatagaattgcggatcatggcgcacctggccaaggatgaaggtctgctccatgcg
ttccgcaacgatctggacgtgcaccgggccacggccgccgaggtgttcggcgttgagctg
gaggccgtcacccacgaccagcgtcgcagcgccaaggcgatcaacttcggcttgatctat
ggcatgagcgcgttcggcctggccaagcagatcggtgtcgatcgcaagcagtcccaggct
tacatcgaccgctacttcgcccgctacccaggtgtgctggcgtacatggagcgcacccgc
gcccaggcggccgagcaaggtttcgtcgaaaccattttcggtcgccggttgtacctgccc
gatatcaatgcgaaaaacccggccttgcgcaaaggcgccgagcgcacggcgatcaacgcg
ccgatgcaaggcacggccgccgacatcatcaagaaagccatggtggcggtggatcgctgg
ctgacggcctcagggctggatgccaaggtcatcctgcaggtacacgacgaactggtgctg
gaagtgcgcgaagacctggtcgaccaggtgcgcgaggaaattcgccagcacatgagcgcc
gccgccacgctggacgtgccgctgctggtggaagtgggcgtggggaataactgggatgag
gcgcactga
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