Pseudomonas brassicacearum DF41: CD58_00235
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Entry
CD58_00235 CDS
T03174
Name
(GenBank) diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CD58_00235
Enzymes [BR:
pbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CD58_00235
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GFIT
Motif
Pfam:
EAL
CSS-motif
MMPL
CSS_CxxC
DUF2430
Motif
Other DBs
NCBI-ProteinID:
AHL31423
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Position
48500..50116
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AA seq
538 aa
AA seq
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MMTAARETLQSWLHRPLFLAMMAAALSAVLLLAGSLAVVMQQIQQRESDQMNAQGERFLQ
RLEQLFGQLREGLDDLQNQPLRGCDDDMIATLRQVSFNYRFVYEAVYIDGSGVCSNRPHQ
SGLSVTRPPDIRGPTYNYWLNTTTEPDEDRAALMLGRGNFRVATSRGHLTDVVDLPPGSS
LLVVLDHGERAIPVLGTDQYWPPTEPWPPKSHNALQVTQTRLIYRMPTDSPEYQLVLIAP
RNGFIVPANAWWMLPISLMLGLGIGFQVFLLARHRQSMDAELHGAIRRGELQVLYQPIFD
LSSRNCVGAEALLRWRRPDGTLTSPDLFIPMAENTGQIRQITDFVLQRLFDQLGQLLRAN
PQLYISVNLAACDVMVPRIGEVIARLLALHRVSAHQIAFEVTERGLIDVLVARDNLQSLR
DVGHQVLIDDFGTGYCSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHALQ
LKVIAEGVEYEAQASYLSSEGVKFGQGWLFAHALSAVQLIELITRGRRLRGRRLDDEA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggctgcccgagaaaccctgcagagctggctccatcgccctcttttcctggcg
atgatggcggctgccttgagcgcggtgctgttgctggcggggagtctggctgtggtgatg
cagcagatccagcagcgtgaaagcgatcagatgaatgcccagggcgagcgctttctgcaa
cgcttggagcaactcttcggacagctgcgcgaaggtctagacgatctgcaaaaccagccg
ttgcgcggatgcgacgatgacatgatcgcgaccttgcgccaggtcagcttcaattaccgc
ttcgtctacgaagcggtgtacatcgacggcagcggcgtctgctccaatcgtccacaccag
agcggcttgtcagtgacccggccgcccgacatccgggggccgacctacaattactggctt
aacaccaccaccgaacccgatgaagaccgcgcggcattgatgctggggcgcggtaatttt
cgggttgccacctctcgcggacatttgaccgatgtggttgatctcccgccgggcagcagt
ctgctggtcgtcctggatcacggtgagcgagccattcccgtgctgggcaccgaccaatac
tggccgccgacagagccctggccaccgaaaagccacaatgccttgcaagtgacccagacc
cggctgatctatcggatgccgaccgacagcccggaatatcaactggtgctgatcgctccg
cgcaacggatttatcgttccggccaacgcctggtggatgttgcccatcagtttgatgctg
ggcctggggatcggcttccaggtgtttctgttggcgcgccaccgtcaatccatggatgcc
gaattgcatggagccatccggcgtggcgagttgcaggtgctgtaccagccgattttcgac
ctgagcagccgcaactgcgtgggggccgaagcgttgttgcgttggcgacgaccggacggc
accctgactagcccggacttgtttatcccgatggccgagaacaccgggcagatccgccag
atcaccgatttcgtgctgcagcggctgtttgatcaattgggccaactattgcgggctaat
ccacagctttacatctcggtgaatctggccgcgtgcgatgtgatggtgccgcgtatcggc
gaagtgatcgcccgcctgctggcgctgcatcgggtctcggcgcaccagattgccttcgaa
gtgaccgagcgcgggctgatcgatgtgctggtcgcccgggataacctgcagtcgttgcgc
gacgtcgggcatcaggtgttgatcgacgatttcggcaccggttattgcagcctggcctac
ctgcaaaccctgccggtggactgcctgaaaatcgataaggccttcattgacgccttgggc
cacgatgccgccagcagcggtgtcgcgccgcacatcattcgcatggcccacgcgctgcaa
ctcaaggtgatcgccgaaggggtcgagtatgaagcccaggcctcctatttgagcagcgaa
ggggtgaagtttggccagggttggctattcgcccatgcactcagtgcggtgcagctcatc
gaactgattacccgcggtcggcgcctgcgcggacgacgcctggacgacgaagcctga
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