Pseudomonas brassicacearum DF41: CD58_00930
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Entry
CD58_00930 CDS
T03174
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD58_00930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_00930
02044 Secretion system [BR:
pbc02044
]
CD58_00930
Transporters [BR:
pbc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CD58_00930
Secretion system [BR:
pbc02044
]
Type I secretion system
Adhesin protein transporter
CD58_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
MMR_HSR1
RsgA_GTPase
DUF87
AAA_22
AAA_29
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AHL31549
LinkDB
All DBs
Position
202574..204730
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVSRVELIHDPRTLHDDPLLDGLLALCMLHQKPASAAMLTTGLPLPKQRLSVELLSR
AAARAGLQGRVLQRKLEQIPAIAMPALLLLKDGRSAVLLGWVGDDQARLLLSESDGGEVT
VSRELLADDYSGKVFFAQPQHKFDVNHGTLIPRARSWFRDTLKRSRWLYADAIAASLLIN
IIAMAAPLFVMNVYDRVVPNQAESTLWVLAVGITGAYVFDLILKMLRSLCLDLAGKKTDL
IISATLFERIVGMAMKYRPARVGSFAQNIHEFQSLRDFLASLTLTTLIDLPFTLLIFAVI
AIIGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGLDAVKVN
NAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLIIAGNLS
MGGLVACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERPLSRKVL
QGAIECRQLNFTYPNQQNAALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGLYQPDDG
SLLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQAAELAGV
HEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDNTGEERL
KQRLAAVVENKTVLLVTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcagaagtcagtcgagtcgaactcatccatgatccacgcaccctgcacgacgat
ccgttgctggacggtttactggcgctctgcatgctgcatcaaaaaccggccagcgccgcg
atgctcaccaccggcctgccgctgcccaagcaacgcttaagcgtcgaattattgtcgcgc
gcggcggcccgtgccggtttgcaaggccgggtgctgcaacgcaagcttgaacagatcccc
gccatcgccatgccggccctgttgttgctcaaggacgggcgcagcgccgtgttgctgggc
tgggtcggtgacgaccaggcacggctgctgctcagcgaaagcgatggcggtgaagtgacg
gtcagccgcgagctgttggccgacgactacagcggcaaagtcttcttcgctcaaccccag
cacaaattcgacgtgaaccacggcacgctgattccccgggcgcgttcgtggtttcgcgac
accctcaagcgctcccgttggttgtacgccgatgctatcgccgccagcctgttgatcaac
atcatcgccatggccgcgccactgttcgtgatgaatgtctacgaccgcgtggtgccgaac
caggccgaatcgactctgtgggtgctggccgtcggtatcaccggcgcctacgtgttcgac
ctgatcctcaagatgctgcgcagcctgtgcctggacctggcgggcaagaaaaccgacctg
atcatctcggcgacgctgttcgaacgcatcgtcggcatggccatgaagtaccgtccggcg
cgggtcggcagctttgcccagaacatccatgaattccaaagcctgcgggacttccttgcc
tcgctgaccctcaccaccctgatcgacctgccgttcactttgctgatcttcgcggtcatc
gcgattatcggcgggcacctggtatggattcccgtgctggcgttcccgattgccctgctg
atcggctatgcgttgcagaagcccctggtggcgaccatggagcgcaccatggccctgggc
gccgagcgccagtccagcctgatcgagaccctggccggcctggacgcagtgaaggtcaac
aacgccgagagcgagcgtcaataccagtgggaacagaccatcggcaccctcagccgcctc
gaactgcgagtgaagatgttgtccgggctggcgatgaacatcaccttgctgatccagcaa
ttggccggggtgatcatgatcgtcttcggcgtttacctgatcatcgccggcaacctgagc
atgggtgggctggttgcctgctacatgctcagcggccgcgccctcagcccgctggcgtcg
ctgtcgggcctgttgacccgctaccagcaggcgcgggtgaccatgacctcggtcgaccag
atgatggagctgccccaggagcgcaatttcgacgagcgtccgctgagccgcaaggtcttg
cagggcgccatcgaatgccgtcagttgaatttcacctacccgaaccaacagaacgccgcg
ttgaagaacatcaacctggtgatcaagccaggcgagaagatcggcatcatcggccgtagc
ggctcgggcaagagctccctggccaagttgctggtgggcctttaccaacccgacgatggt
tctttgttggtggatggcgtggacatccgccagatcgacgtcagcgagctgcgctacaac
atcggctatgtgccccaggacatccaactgctcgccggcaccctgcgggacaacctgacc
tccggtgcccgttacgtcgaagacgagctggtactccaggccgcagagctggcgggggtg
catgaattcgcccgcctgcatccgcaaggctatgaactgcaggtcggtgaacgtggacag
aacctgtccggcggccagcgccagaacgtcgccctggcccgtgcgctgctactcaatccg
cccattctgctgctggacgaacccaccagcgccatggacaacaccggtgaggaacgcttg
aagcagcgcctggccgccgtggtggaaaacaagacggtgttgctggtgacgcaccgggct
tccttgctgtcgctggtagaccgcctgttggtgatcgaccgtggacaaatcctggccgac
ggcccgaaagctgccgtgatggaagcgttgaagaaggggcagatcagtgttgcttaa
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