Pseudomonas brassicacearum DF41: CD58_02070
Help
Entry
CD58_02070 CDS
T03174
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CD58_02070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_02070
Enzymes [BR:
pbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD58_02070
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD58_02070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
HypA
Zn_ribbon_6
iSirtuin
nSTAND3
TrwB_AAD_bind
AAA_22
AAA_25
DUF2428
AAA_11
Zn_ribbon_3
RUBY_RBDX
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
AHL31752
LinkDB
All DBs
Position
complement(453181..455400)
Genome browser
AA seq
739 aa
AA seq
DB search
MPNAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRLRVPFGRREMIGILVEITDHSEVP
VDKLKPALALLDATPPLPASLFKLCLWTSQYYQHSLGDTLSWALPVLLRQGEPAEARQER
FWSVTPGASLDDPRIARAPRQREALATLAQHPHGVAHQVLSKLMLSKDSLDLLLAKDLVQ
VEVRRHAPGARHEHWLAQPELPLNAEQRAACEAIRAGLDSYHAFLLAGVTGSGKTEVYLQ
LIRQTLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLEAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCERCDARMTVHQRHGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEAFLDEA
CSEAERLLAQQNLTGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSAWLLVLEQ
MPSGRAVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaacgccattctgcgcctcgccctgccttcgcccctgcgccgcctgttcgactac
cgcgccccggccggggtcttgcgcgcccagttgcagccgggcatgcgtctgcgggtgccg
ttcggccggcgggaaatgatcgggatcctggtggaaatcaccgaccacagcgaggtcccg
gtcgacaaactcaaaccggccctggccctgctcgatgccacgccaccgctgcctgcatcg
ctgttcaagctgtgcctatggacctcccagtactaccaacacagtctcggcgacaccctg
agctgggcgctgccggtgctgctgcgccagggcgaaccggccgaggcacgccaggaacgg
ttctggtcggtgacaccgggcgcctcgctggacgatccgcgcattgcccgggccccgcgc
cagcgtgaggccttggcgaccttggcccagcatccccacggtgtggcccatcaggtgctg
agcaaactgatgctcagcaaggacagcctcgacctgttgctggccaaggacctggtccag
gtggaagtccgccggcacgcccctggcgcccgccatgaacattggctggcccagccggaa
ctgccgctcaacgccgaacagcgtgccgcttgcgaggcgattcgtgcagggctcgatagc
tatcacgcgtttctgctggcgggcgtcaccggcagtggcaagaccgaagtctatctgcaa
ctgatccgccagacgctggaggccggcaagcaagccctggtgctgatcccggaaatcaac
ctcggtccacaaaccctggcgcgcttcgaacaacgtttcaacgcgcggatcgccctggtg
cactcggcagtcaacgaccgcgaacgcctggaagcctggctcgccgcccgggacggcgag
gccgatatcatcatcggcacccgctcggccctgttcacgccgatgaaaaaccctggcctg
atcatcatcgacgaagaacacgacggctcctataaacagcaggaaggcctgcgttaccac
gcccgcgacctggcgctggtgcgcgcccgccaggaaaacattcccattgtgctcggttcg
gcgacgccgtccctggaaagcctgcacaacgcctacaccggtcgttacggcctgctgcgc
ctgaacgagcgggccggcggcgccaagcaaccgcgcttcctgcgcctggatgtaaaaagc
cgcccgctggacagcggtatttccggaccgatgcagcaagccatcggccagaccctggct
gccgggcaacaggtcctggtgttcctcaaccgccgtggtttcgccccgaccctgctgtgt
cacgactgcggctggatgtccggctgtgaacgctgcgatgcgcggatgaccgtgcatcaa
cgccacggcgagctgcgctgccaccattgcggccacgtagaacgcgtgccaaggcactgt
ccgcagtgcggcaaagtggacttgcgccccgtcggcgcaggcaccgaacgcgctgaagag
cggctgggcatcctgtttccggactatccggtgctgcgggtggatcgtgacagcacgtcg
cgcaaggacgcgatgaaccagttgttcgcgacgattcaaaaaggccagccgtgcatcctg
gtaggcacgcagatgctcgccaaaggacatcacttcccccgagtcacgctggtgtcgatc
ctggacgccgacggcggactgttctccggcgacttccgcgccagcgagcgcatggcgcag
ttgatcgtccaggtcgcgggccgggccggacgagccgaggaaccgggcaaagtcatcatc
cagacgcacctggcggatcacccgctgctgatacaactcacggagcaaggctactttgcc
ttcgccgaacaggccttgagcgaacgtcgcagcgccggcctgccgccatttgcccacctg
gcgctgctgcgggctgaagcccataagcccggacaggccgaagcgttcctcgacgaggcc
tgcagcgaggccgaacgtttgctcgcgcagcagaacctcaccggaatcgaactcttgggc
ccggtaccggctccgatggaacggcgggccgggcgttatcgggcacagcttttattacag
gccaatgcccgggcgccgctgcatcgactgctgagcgcctggctgctggttctggaacag
atgcccagtgggcgagcggtgcgctggtcgctggatgtggatccggtggatttgtattga
DBGET
integrated database retrieval system
