Pseudomonas brassicacearum DF41: CD58_02665
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Entry
CD58_02665 CDS
T03174
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00730
Thiamine metabolism
pbc01100
Metabolic pathways
pbc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CD58_02665
Enzymes [BR:
pbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CD58_02665
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AHL31863
UniProt:
A0AAQ0TER3
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All DBs
Position
597715..599604
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AA seq
629 aa
AA seq
DB search
MTTKAKNATNLSDSAKVDEQSVQPFTRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEI
NAPVVVYDTSGPYTDPNVIIDVRKGLADVRSSWIEARGDTERLAGLSSNFGQERLADPEL
TKLRFAHVNNPRRAKPGANVSQMHYARKGIITAEMEYVAIRENMKLEVARAAGLLDQQHA
GHSFGASVPKVITPEFVRDEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGA
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAQGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaagcaaaaaacgcgaccaacctcagcgattcggccaaggtcgatgagcaa
tcggtccagccctttacccgctcgcaaaaaatctatgtccagggcagtcgcccggacatc
cgcgtgcccatgcgcgaaatcagcctcgacgtgacccccaccgacttcggcggcgaaatc
aacgcgccagtggtggtgtatgacacgtcgggcccgtacaccgacccgaacgtgatcatc
gacgtgcgcaaaggcctggccgatgtgcgttcttcgtggatcgaagcccgtggcgacacc
gaacgcctggcgggcctgagttccaacttcggtcaggaacgcctggccgatcccgaactg
accaagctgcgcttcgcccatgtgaataacccacgtcgtgccaagccgggcgccaacgtc
agccagatgcactacgcgcgcaaaggcatcatcaccgccgagatggaatacgttgccatc
cgcgaaaacatgaagctggaagtggcccgcgccgccggcctgctggaccagcaacacgcc
ggccacagcttcggcgccagcgtgccgaaagtcatcaccccggaattcgtacgcgatgaa
atcgcccgtggccgcgcgatcatcccggccaacatcaaccacaccgaactggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggcaacattggcaacagtgccctgggt
tcgtccatcgaagaagaagtggcgaaattgacctggggcatccgctggggctcggacacg
gtcatggacctgtccaccggcaagcacatccatgaaacccgcgaatggatcatccgcaac
tcgccagtgccgattggcaccgtgccgatctaccaggccctggaaaaagtcggcggcgcg
gccgaagacctgacctgggagctgttccgcgacacgctgatcgaacaggccgaacagggc
gtcgactacttcaccatccacgccggcgtgctgctgcgctacgtgccgctgaccgccaag
cgcgtcaccggtatcgtcagccggggtggttcgatcatggccaagtggtgcctggcgcac
cataaagaaaacttcctctacactcacttcgaagacatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggcgatggcctgcgtcccggctcgattgccgacgccaacgac
gaagcgcagttcggtgagctggaaaccctcggcgagttgaccaagattgcctggaagcac
gacgtgcaatgcatgatcgaaggcccgggccacgtgccgatgcagttgatcaaagagaac
atggacaagcagctcgagtgctgcgacgaagcgccgttctacaccctgggcccactgacc
accgacatcgcgccgggctacgaccacatcacctccggtatcggtgcggcgatgatcggc
tggttcggttgcgccatgctctgctacgtgaccccgaaagaacacttggggctgccgaac
aaggatgacgtcaagaccgggatcatcacctacaagatcgccgcccacgcggccgacttg
gccaaaggtcaccccggcgcgcagatccgcgacaacgccttgagcaaggcgcgcttcgag
ttccgctgggaagaccagttcaaccttggcctggacccggacaccgcccgttcgtaccac
gacgaaaccctgccgaaggactcggccaaggtcgcgcatttctgctcgatgtgcgggccg
aaattctgctcgatgaaaatcacccaggaagtgcgcgagtacgcggccaaccagcgcatt
gaagcggtggatgtcgatgtcgcccagggcttggcggagcaggctgagcggttcaagcag
gaaggtagtcagctttacaagaaagtgtga
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