Pseudomonas brassicacearum DF41: CD58_02775
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Entry
CD58_02775 CDS
T03174
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CD58_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbc03019
]
CD58_02775
03009 Ribosome biogenesis [BR:
pbc03009
]
CD58_02775
Messenger RNA biogenesis [BR:
pbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CD58_02775
Ribosome biogenesis [BR:
pbc03009
]
Eukaryotic type
Pre-60S particles
RNases
CD58_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHL31884
LinkDB
All DBs
Position
624918..625460
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEILAGMDEW
NTRQHGGSGLTQRVRESKISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPEVRDSFQKGGSHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaacctgatctggatcgacctggaaatgaccggtctgaaccccgac
accgacgtcatcatcgaaatggccaccatcgtcaccgacagcgacctcaacaccctggcc
gaaggcccggtgatcgcgatccatcacagcgacgagatcctggccggcatggacgaatgg
aacacccgccagcacggcggctcgggcctgacccagcgggtgcgcgagagcaagatcagc
atggccgaagccgaggcccagaccatcgcgttcctggaacaatgggtgccgaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccgtcgcttcctctatacccacatgaaa
tccctggaaagctatttccactaccgcaacctggacgtctccaccctcaaggagctggcc
gcccgctgggctccagaagtgcgtgacagcttccaaaagggtggcagccacctggccctg
gacgacattcgcgagtccattgccgagctgcagcattaccgcaagcatttcatcaagttc
tga
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