Pseudomonas brassicacearum DF41: CD58_04240
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Entry
CD58_04240 CDS
T03174
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbc03016
]
CD58_04240
Enzymes [BR:
pbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CD58_04240
Transfer RNA biogenesis [BR:
pbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CD58_04240
Prokaryotic type
CD58_04240
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AHL32142
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All DBs
Position
979377..980294
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGQADVEAVLPHFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFDGNTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRVAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaaaccg
ctggggttcacctccaacgcggcgttgcagaaggtccgctggctgctcaacgccgagaaa
gccgggcacaccggtagcctcgatccgctggctactggcgtattaccgctgtgcttcggc
gaagcgaccaagttctctcaatacctgctcgactccgacaaggggtatgaaaccctggcg
caactgggcaagaccaccaccacggcggacgccgaaggtgaggttctgctggagcgcccg
gtgaccgttggtcaggcggatgtcgaggccgtattgccgcattttcgcgggcaaatcagt
cagataccgccgatgtactccgccctcaagcgtgatggccagccgttgtacaagctggcc
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgacggtaatactgcacggctcgccgtggattgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggtgagcagctcggctgtggcgcgtacgtggcagaattg
cgacggacccaggccgggcctttcacgttggcccagacggtcacgctggaagagctcgaa
gcggtgcatgccgaaggcggcaacgaagcggtcgaccgtttcctgatgccatcggacagc
gggttgctggattggccgctgttgcagttctcggaacacagcgcgttctactggctaaac
ggccagccggtacgtgccccggatgcaccgaagttcggcatggttcgggtacaggatcac
aacggtcgcttcatcggcatcggtgaagtgagcgaagacgggcgcgttgcgccgcgtcga
ctgattcggtcggaatga
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