Pseudomonas brassicacearum DF41: CD58_04965
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Entry
CD58_04965 CDS
T03174
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_04965
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CD58_04965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
AAA_5
GAF_2
Mg_chelatase
HTH_8
AAA
AAA_2
HTH_50
GAF_3
TIP49
Motif
Other DBs
NCBI-ProteinID:
AHL32277
LinkDB
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Position
complement(1136082..1137638)
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AA seq
518 aa
AA seq
DB search
MTATTLLTSLLPLVADLSRELPEGERYRRLLGALRALLPCDAAALLRLDGDCLVPLAVDG
LSTDTLGRRFRVSEHPRFEALLANPQPTRFAADSDLPDPYDGLVEGLDEHLEVHDCMGCP
LFVDERPWGLLTLDSLDSGRFEPIDLSALQAFASLAAATVSAAERIEGLALKAEDEHRRA
EVYRQASGQQHRDMVGQSKAHKRLVEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASK
RAEQPLISLNCAALPETLVESELFGHVRGAFTGATSDRRGKFELADGGTLFLDEVGELSL
TVQAKLLRVLQSGQLQRLGSDKEHRVDVRLIAATNRDLADEVRNGRYRADFYHRLSVYPL
QVPALRDRGRDVLLLSGFFLEQNRSRMGLNSLRLNSDAQAALLAYDWPGNVRELEHLIGR
SALKALGRCAVRPKILSLGAQDLDLPQVAEENPAPSSAAPAPTMDGISTDLREAVDDFQR
RLIGASLERHQHNWASAARELGLDRANLGRMARRLGLK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaccacactgctgacttccctgctgcccctggtggccgacctctcccgtgaa
ctgcctgaaggcgagcgttatcgacgcctgctcggcgccttgcgggccctactgccttgc
gacgcggcggcgttgttgcgcctggacggtgattgcctggtgccgctggcggtagatggc
ttgagcaccgataccctgggtcgacgattccgggtcagcgaacacccgcgcttcgaggca
ctgctggccaacccgcagcccacccgcttcgccgccgacagtgatttacccgatccctac
gacgggctggtggagggtctcgacgagcatctggaagttcacgactgcatgggctgcccg
ctgttcgtcgacgagcgtccctggggcctgctgacgctcgattcgctggactcgggccgc
ttcgaacccatcgacctgagcgccctgcaggcgttcgccagcctcgcggccgccacggtc
agcgccgccgaacgcatcgagggcctggccttgaaggccgaagacgagcaccgccgagcc
gaggtctatcgccaggccagcggccagcaacaccgcgacatggtcggccagagcaaggcc
cataaacgcttggtggaagagatcaagctggtgggcggcagcgacctgaccgtgctgatc
acgggcgaaaccggcgttggcaaggaactggtcgcccaagccattcatgccgcgtccaag
cgcgccgaacaaccactgatcagcctcaactgcgccgcgctgccggagaccctggtggaa
agcgaactcttcggccacgtacgcggtgcgttcaccggggccacgagcgaccgacgcggc
aagtttgaactggccgatggcggcacgttgttccttgatgaagtgggcgagctgtcgctg
accgtccaggccaagttactgcgggtgttgcagagcggccagttgcaacgcctgggttcg
gacaaggaacaccgggttgatgtgcgcctgatcgcggccaccaatcgcgacctcgccgat
gaggtgcgcaacggccgttaccgggccgacttttatcatcgcttgagcgtgtacccgttg
caggtaccggcgttgcgtgatcgcggacgagatgtcctgttgctcagtggcttcttcctg
gaacagaaccgttcgcgcatgggccttaacagcctgcgcctgaacagcgacgcccaggcc
gccctgctggcctacgactggccgggtaatgtgcgtgaactggaacacctgatcggccgc
agtgccttgaaagccttgggcaggtgcgcggtgcgaccgaaaatcctcagcctcggcgcc
caggatctcgacctgccccaagtcgccgaggaaaaccctgcgccctcatccgccgcccct
gcgccgacgatggacggcatcagcacagacttgcgcgaagcggtggacgacttccagcgc
aggctgatcggcgccagcctggaacgtcaccagcacaactgggccagcgccgcccgggag
ctgggactggaccgggcgaatctggggcggatggccaggcgattggggctcaaatga
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