Pseudomonas brassicacearum DF41: CD58_05560
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Entry
CD58_05560 CDS
T03174
Name
(GenBank) GntR family transcriptional regulator
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_05560
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CD58_05560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_DeoR
Rrf2
MksE
HTH_11
FmdA_AmdA
DIP2311-like_C
PASTA
TrmB
Motif
Other DBs
NCBI-ProteinID:
AHL32386
LinkDB
All DBs
Position
complement(1253994..1254698)
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AA seq
234 aa
AA seq
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MSKYNRIYNDLLASITTERLERGARLPSETELMDSYQASRGTVRKAIEQLQERGFAQKIH
GKGTFVLSTSPIEFQLGGIVSFQETYPRLGDDVSTDVVEFSQMPLEGALLEHIKAPAGSQ
VTRIKRVRRIDGKRVILDINHFVSDVIPGLTRDIAERSIYAFIEQTLQLQIAYAQRTIEA
VRCGKDDQQHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDVARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacaaccggatctacaacgatctgctggccagcattaccaccgaacgcctg
gagcgtggcgcccgcctgccttcggaaaccgaactgatggacagctaccaggccagtcgc
ggcaccgtgcgcaaggccatcgaacagcttcaggaacgtggttttgcccagaagatccac
ggcaagggcaccttcgtgctgtcgacctcccccatcgaatttcagctcggcggcatcgtc
agtttccaggagacctacccgcgcctgggtgacgacgtcagcactgatgtggtcgaattc
agccaaatgcccttggaaggtgccctgctcgagcacatcaaggcacccgccggcagccag
gtgacgcgcatcaagcgggtacggcgaatcgacggcaaacgggtgatcctggacatcaac
catttcgtcagcgacgtgatccccggcctgacccgcgacatcgccgagcgctcgatctac
gccttcatcgaacagaccctgcagctgcaaatcgcctatgcccagcgcaccatcgaagcg
gtccgctgcggcaaggacgaccagcaacacctggacctcgacggccagagccacgtcatc
gtggtcagcaaccagacctttctccaggacggccgacagttcgagtacaccgaatcacgg
cataccctggataagttttatttttcggatgtggcgcggcgttga
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