Pseudomonas brassicacearum DF41: CD58_06190
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Entry
CD58_06190 CDS
T03174
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbc03016
]
CD58_06190
Enzymes [BR:
pbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CD58_06190
Transfer RNA biogenesis [BR:
pbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CD58_06190
Prokaryotic type
CD58_06190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHL32503
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All DBs
Position
1388000..1389058
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AA seq
352 aa
AA seq
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MTELELLGPRAYGEPLGSAVLKAIAEDFQVDEVLDIPLTGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSTAENDTLKILKTGRHKR
KLQRGAHSANGFTLRLTQFKGDVAAIDARLQQIARQGIPNYFGTQRFGHDGGNVVDARAW
AARKALPEQRNVRSRLLSTARSFLFNRVLAARVADGTWQQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGPSPTAGATFELEQAVAEREADLRDWLINAGMSHERRI
LRLPIGGLSWHYPQPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactggaactgttgggcccacgtgcctacggcgagccgctgggcagtgcggta
ctcaaggccatcgctgaagacttccaggtcgatgaagtgctcgacatcccgttgaccggc
gatggcgagcatttgtggatctgggtggaaaagcgcggcttgaacacggaagaggccgcc
cggcgaattgccaaggccgccggcgtgccgttgcgcaccgtcagttacgccggcctcaag
gaccgacaggccctgactcggcaatggttcagcgtccaattgccgggcaaggccgacccg
gacctgtcgacggcagagaatgacacgctgaagatcctcaagaccggccggcataaacgc
aaactgcaacgcggcgctcactcggccaatggcttcaccttgcgcctgacccagttcaag
ggcgacgtggcggccatcgatgctcggctgcaacagattgctcgccagggcatccccaac
tatttcggtacccaacggtttggacatgacggcggcaatgtcgtcgatgcccgtgcctgg
gcggcgcgcaaggccttgccggaacagcgcaacgtgcgttcgcggctgttgtccaccgcc
cgcagtttcctgttcaaccgggtactggcggcgcgggtggccgacggcacctggcagcag
gcgcaggtcggcgacttgctggccttcactgacagccgcagctttttcccggcgggcgag
gctgaatgcagcgatccacgcctggcgatcctcgatctgcacccgaccgggccgcagtgg
ggcgaagggccttcgcctacggctggcgcgacctttgagctggaacaggccgtcgccgag
cgcgaagccgatttgcgggattggttgataaacgcgggaatgagtcacgaacgtcgcatc
ctgcgactgcccattggcgggctgtcgtggcattatccccagcctgacattctgcaactg
gaattcgtccttccggccggatgcttcgccactgtcttggtgcgcgaactcgtcgatctg
gtgccggtggggcagacggacagctcatgcgtattctga
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