Pseudomonas brassicacearum DF41: CD58_06410
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Entry
CD58_06410 CDS
T03174
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbc03009
]
CD58_06410 (rimO)
Enzymes [BR:
pbc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CD58_06410 (rimO)
Ribosome biogenesis [BR:
pbc03009
]
Prokaryotic type
ribosomal protein modification factors
CD58_06410 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AHL32544
UniProt:
A0AAW8M6X0
LinkDB
All DBs
Position
complement(1424472..1425812)
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AA seq
446 aa
AA seq
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MSTTTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDAVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQIG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactaccgcgccagccaatccgaaggttggcttcgtatccctgggttgcccg
aaagctctggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtt
gtgtccacgtaccaggacgccgacgtggtagtggtcaacacctgcggcttcatcgactcg
gccaaggctgaatccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtggaagaaggcaacatccgcaacgtgcacccgagcgtgttg
gccgtgaccggcccgcagcagtacgagcaggtggtcaacgccgtgcacgacgcagtgccg
ccacgccaggaccataacccgctgatcgacctggtgccgccacagggcatcaagctgacc
ccgcgccactacgcctacctgaagatctccgaaggctgcaaccacagctgcagcttctgc
attatcccgtcgatgcgcggcaaactggtgagccgcccggtgggcgatgtgctcgacgag
gcccagcgcctggtcaaggccggcgtcaaagagttgctggtgatttcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcaccctcggcgtctgggtccgcttgcattac
gtctacccgtacccgcatgtcgacgagctgatcccgctgatggcggccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcctcaaggccatgaagcgc
ccggctttcgaagacaagaccctggcccgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttccccggcgagaccgaagaagacttccag
tacctgctggactggctgaccgaagcccagctcgaccgtgtcggctgcttccagtattcc
cccgtcgaaggcgcaccggccaacgacctggaccttgacgtggtaccggatgacgtcaag
caggaccgttgggagcgtttcatggcgcaccagcaagccatcagctccgcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtcttggtggatgaagtggacgagcaaggtgccgtg
ggccgttgcttcttcgacgcgccggaaatcgatggcaacgtcttcatcgacaacggcagc
aacctcaagccaggcgacaaggtctggtgcaaggtgaccgacgccgacgaatatgacttg
tgggctgaacagatcggttga
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