Pseudomonas brassicacearum DF41: CD58_07650
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Entry
CD58_07650 CDS
T03174
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbc03016
]
CD58_07650
Enzymes [BR:
pbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CD58_07650
Transfer RNA biogenesis [BR:
pbc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CD58_07650
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AHL32769
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All DBs
Position
1672636..1673769
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AA seq
377 aa
AA seq
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MAIDIHWIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPL
TIDNWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQSVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVQLRPKLSDERFTWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDLPRNRII
REHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLDLIQRAASVPPEQWPPAVAEPL
PIEASALVKRLRALGQAEAERLGIAPELMLRKKTLEALIKSGFPEGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacaacgatagcctcggtcagttttgcgccgaa
tggcagcagttgcccttcgtcgccctcgacaccgaattcatgcgggtcgacaccttttac
cccattgccggtttgctgcagatcggcgacggcaagcgtgcctacctgatcgaccccttg
accatcgacaactggcagcccctggccgcactgctggaaaacccggcggtgctcaaggtg
ctgcacgcctgcagcgaagaccttgaggtcctgctgcgcttgacgggcagcctgcccgcg
ccactgttcgatactcaactggccgccgcctacctgaacctgggtttttccatgggctac
tcacggttggtgcagtcagtgctggggatcgaattgcccaagggcgagacccgttccgac
tggttgcagcggcccctgtccgagacgcagatcagctacgcggctgaagatgcggtgcat
ctggcggaagtgttcgtgcaactgcgcccgaagctttccgacgaacgattcacctgggtc
ctggaggatggcgccgagctggtggccaacctgcgtcgcgaagtcgacccctatgaggtg
taccgcgaggccaagctggcctggaaactgtcccgtgcccaactggctgtgctgcgcgaa
ctgtgtgcctggcgggagcgagaggcgcgggcccgtgacttgccgcgcaatcgcatcatt
cgcgaacactcgctatggcccctggcccgtacgcagccggataacctcggcgcgctggcg
aaaatcgaagacatgcacccgcgtaccgtacgccaggacggcgagtttctgttggacctg
attcagcgcgccgccagcgtgccgcccgaacaatggccgcccgccgtggcggagccgttg
cccatcgaggcctcagcgctggtcaagcgtctgcgggcgttggggcaggctgaagccgag
cgcctggggattgccccggagctgatgctgcgcaagaaaaccctcgaagcgctgatcaag
agtggcttccccgagggcccttaccaattgcccgattcgctgcgtggctggcgccgcgaa
ttgatgggccaggcgctgctcgacagcctggccactgccggagaacagccttga
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