KEGG   Pseudomonas brassicacearum DF41: CD58_08025
Entry
CD58_08025        CDS       T03174                                 
Name
(GenBank) peptidoglycan-binding protein LysM
  KO
K08086  pilus assembly protein FimV
Organism
pbc  Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbc02044]
    CD58_08025
Secretion system [BR:pbc02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   CD58_08025
SSDB
Motif
Pfam: FimV_N LysM TPR_19 DUF2570 SlyX Nup54 ATG16 CEP135_TSGA10_CC GPS2_interact ATG14 ARM_TT21 FAM76 DivIC
Other DBs
NCBI-ProteinID: AHL32841
LinkDB
Position
1771555..1773558
AA seq 667 aa
MLGSLQSTLRSWVNVSVVVGALGYSALASALGLGEITLHSALNQPLRADIALVDVAGVSE
GDLSASLANPDDFSRAGVERVFFLNSLRFTPVLRGERSFIRVTSSKPVEEPFLNFLVQLN
QPNGRLLREYTVLLDPPGTPGIVPARDDPSGAPESSLATRATPAIKPPPAVQGKRYTVVQ
GDNPWVIAKRLHDAGSNASVNELMQGIQALNLGSDRLSIGQRLLLPDSAVLPTPAQTAAP
ASVASDEQLAGSVLQNQQQQQTIDELQARLQAQDQEIAGQRKQISELQTRLAEVAPAAVA
PTPPQSEPPAPVAAPETDAAPVTEPTPEPEGINWLWIAGLVGLLGLLALLLLLRRRQQQE
QVDAQPMPGRPEPMLEDDDTDTYASTTHTEQPEAAASFNNGDAPLGDVLDGVGIYLTYGR
FTEAAGLLRAALLAEPERTDLGLKLLEVLGKQGDVIGFQAQEHHLLAQGVDARTLEEIRG
RYPKVAAITAPVVAPIEPLAPASAPEPEPAGVPGDEFELDLEALSMETSWDLTEASDNAP
GKTAAPSPAVDAPEGLSLSGFDESDLQWGAPLETESLDDAFLDGFADEEQSLELEPLPLE
SMTLETMPFETMPFEPQAPEHSIKLEQAQNCIDDGDVETAITLLEELLEEGDEPLKQTAR
VLLAGIR
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgcttggaagtttgcagtccacgttgcgcagttgggtcaacgtgtcggtcgtcgtgggt
gcccttgggtattcggctttggcttccgcgctggggctgggggagatcacgcttcattcc
gccttgaaccagccgttgcgcgccgatatcgccctggtcgatgtggcaggggtgagtgag
ggcgatttgtcggccagcctggccaaccctgacgatttcagccgtgcgggtgtggagcgg
gtgttctttctcaacagcctgcgcttcacgcccgtgctgcgcggtgagcgcagtttcatt
cgggtgacctccagtaaacccgtcgaggaaccgttcctcaatttcctggtgcaactcaat
caacccaacggacgtctgctgcgcgaatacaccgtgctgctcgacccgccaggtacaccg
ggtatcgtgccggcccgcgatgacccttctggtgcccccgagtcttcgctcgcgacccgg
gcaacgcctgccatcaagccgcccccggcggtacagggcaagcgctacacggttgtgcag
ggggacaacccctgggtcatcgccaaacgcttgcatgacgccggcagcaacgcgtcggtc
aatgagctgatgcaggggatccaggccctgaaccttggcagtgaccggctctccatcggg
cagcgcttgttattgcccgactcggcggtactgccaacgcctgctcaaacggctgccccg
gcctccgttgcgtccgatgagcaattggctggcagcgtgctgcaaaaccaacagcaacag
caaaccatcgacgaactgcaggcccgacttcaggcccaggatcaggaaattgccggtcag
cgcaagcagatcagcgagttgcagacgcgactggccgaggtggcgcccgctgcggttgcg
ccgacgccgccacagtcggagccacctgcacctgttgctgcgccggagacggacgcagcg
ccagtgacagagccaaccccggaacctgagggcatcaattggctgtggatagcgggactg
gtgggcctgctgggtttgctggcgttgttgctgttgctccgtcgtcggcagcagcaggag
caggtcgacgcgcagccaatgcctggacgtcccgaaccgatgctggaggacgacgacacc
gacacttatgcctcgacaacccacacggagcagcccgaggccgccgcgtcgttcaataac
ggtgacgcgcccttgggggatgtgctggatggcgtcgggatttacctgacctatggtcgt
ttcaccgaagctgcaggattgctgcgtgccgcgttactggcggagccggagcgcaccgat
ctcgggctcaagttgctggaggtgctgggcaagcagggcgatgtcattggtttccaggcc
caggagcatcatctattggcccagggtgtcgatgccagaacgctggaggagattcgcggg
cgctaccccaaggtcgcggcgatcaccgcccctgtggtggcgccgatagaaccgctggca
ccggcctctgcacctgaacctgaacctgcaggcgtgcccggcgacgaattcgagctggat
ctggaggcgctgtccatggagaccagctgggacctgaccgaagcctcggacaacgcccct
ggaaaaactgctgcgccatcgcctgctgtcgatgcgcccgaggggttatcgctctcgggt
ttcgacgagtcggacctgcaatggggcgccccactggaaaccgagtcgctggacgacgcc
tttctcgacgggtttgccgatgaagagcagtccctggagctggagccgctgccgctcgaa
tccatgaccctcgaaaccatgcccttcgaaaccatgcccttcgaacctcaggcaccggaa
cattcaatcaaactggagcaggcgcaaaactgcatcgacgacggtgatgtggagaccgcc
atcaccctgcttgaagaattgctcgaagagggtgacgaacccctcaagcagactgcccgg
gtgttgctggctgggattcgctga

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