Pseudomonas brassicacearum DF41: CD58_08925
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Entry
CD58_08925 CDS
T03174
Name
(GenBank) hypothetical protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbc01002
]
CD58_08925
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
CD58_08925
Peptidases and inhibitors [BR:
pbc01002
]
Cysteine peptidases
Family C82
CD58_08925
Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CD58_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
FAS_meander
Motif
Other DBs
NCBI-ProteinID:
AHL33008
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Position
1962869..1963840
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AA seq
323 aa
AA seq
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MLPRLPAVTRCLSLAALCMAGPVAALELPLPPPGEDIIGQVQVIKAKYEDTFADLGTTYD
LGYTEMVAANPGVDPWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGRNVVY
TFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGP
FKFTLGTPGYLIHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDPYKLG
LSGGKVYLEAHTPLDDKGNPSVVDKHTAVINAMLKREDITSNQRMDWNVVRDVVAAEDGL
PVEIAVPSTSAPMVSSAPIDLQQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgcgcttgcctgccgtcacccgctgcttgtctcttgccgccctgtgtatggct
ggccccgttgcggcactggagctgcccctgccaccgccgggtgaagacatcattggccag
gtgcaggtcatcaaggccaagtacgaagacaccttcgccgacctgggcaccacctacgac
ctgggctataccgagatggtcgccgccaacccgggggtcgatccctggttgccgggcgct
ggcaccgagatcgtgctgccgacccgtttcatcctgcccccgggtccgcgcgagggcatc
gtgatcaacctcgctgagtaccgtctctactactttcccaaaggccgcaacgtggtctac
accttccctctgggcattgggcgggaaggctggggatcgccgatcgcccacaccagcatc
atcgccaagacgccgaacccgacctggactccgccggcttcgatcaaggccgagcatgcc
gccgacggtgacccgctgccgaatgtggtgccggccggtcccgacaatccgctgggcccg
ttcaagttcaccttgggtaccccgggctacctgatccatggttcgaacaaaaaattcggc
atcggcatgcgcaccagccatggttgcttccggatgttcaataacaacgtcctggaaatg
gccggcatggtgccggtgggcacgtcggtacggatcatcaacgacccgtacaagctgggc
ctgagcggcggcaaggtgtatctggaggcccatacaccgctggacgacaagggcaacccg
tcggtggtggacaagcacactgcggtgatcaacgcgatgctcaagcgtgaagacatcacc
agcaaccagcgcatggactggaacgtggtgcgcgacgtggtggctgccgaagacgggctg
ccggtcgagatcgctgttccgagcacgtcggcaccgatggtctcgagcgcgccgatcgac
ctgcagcagtaa
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integrated database retrieval system
