Pseudomonas brassicacearum DF41: CD58_09560
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Entry
CD58_09560 CDS
T03174
Name
(GenBank) type IV secretion protein Rhs
Organism
pbc
Pseudomonas brassicacearum DF41
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
PAAR_motif
RHS
GtfB_M
Motif
Other DBs
NCBI-ProteinID:
AHL33130
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All DBs
Position
complement(2113648..2118045)
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AA seq
1465 aa
AA seq
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MSDALWAARLGDALNHTSMMADILGGVLEVAANIAITAVATAAVVAATGITVVTGGLGCV
VLGLVVGTIVGLAMSKTGADKGLSNLCEGIGNALFPPTVQANILTGSTNTLTNNIPAARA
AGAIESHVAPAGTELEAPEPEAEPSYLDMAENFFSQMWRPTVATPAPGAVPKPLDMIVCM
KHPPMPPQFLAEGSDKVTINGQPAVRSGDRSTCDATVVSAGLISPNVIIGGGSVVVREIR
SGKTPGVGLAVTALLMLKGGKGKFFSKLPCMLVGGAVSMAASSAANAAANAALGSSNPVH
AATGAKVLGGNEELDFVLPGLLPIDWQRVYNSRDERRDSLFGAGWSVAYEVQVQILPHPE
GGETLVYTDEQGRPIDMGSIPLGGAVFSAGEGLAVRRHVNGQLLIESDDGLYRLFEPTPA
NPSHLRLGQLGDRNDNRIYLDYDEAGRLVRLRDTFDLVQVELVREHDHVSQIERLYPDQP
REVLVSYAYDSAGNLAEVRDASGQVQRRFSYDAGRRMVEHQLPTGLRCFYDWALIEDQEW
RVVRHWTDEGDAYQFDYDLKAGTTRITDSLQRVSTRQWNHQHQITQYTDNVGQTWLFEWN
DERQLLNATDPQGGRYAYSYDEAGNLISETDPLGRSDSTLWLEHWSLPLVDTDAVGNSWK
YRYDQRGNCIAETDPLGHVTRYRYDAHGQVIEIIDATGKSKQLRWNPFGQLVEHVDCSGY
PTRFSYDPRGYLQTITDALGERTQFSYDAQGRLLSSQLPDGRTEQYQRDVAGQLIGYTDP
AGHTTRYQHNRRGQVRQRTDAQGRQVQFAYDSFGRLQALTNENGESYRFAWDAGDRLAEQ
RNLDGSAKGYTYDALNNVKRVETVAAPRGDYQPSEKPLVHQLERDAIGRLTTRITPDGQS
RYSYSPLNQLIEATVIDNDGNEQRLGFAYDALGYLIEEQSSAGVLKHHYDELGNLIQTHL
PDGRWVNRLYYGSGHLHQINLDGQVISDFERDRLHREVLRTQGQISTRSEYDRSGRLRSR
QRRHTSQPALIPAADQTHFEFDLGDHLVGRLERLPKGQQRQLLHYDVTGRILASQSTRQG
QNETFSFDAAANLLDSSPGTGGRVTHNQLKRYQNKHYRYDGFGRMIEKRSSRHGLQRFSY
DSDHRLVEVRTHKSDGESIVRMRYDPLGRRIEKTEHDDNGRLITCTRFDWDGLQLLKEHK
NSLTSLYLYIGDSHEPLARVDGIDEHQRIRYYHNDPNGLPQALTESDGHPLWHALYHVWG
NTADEVREPYYIEEQNLRFQGQYLDRETGLHYSTFRFYDPDIGRFTTPDPLGLAASLNLY
RYAPNPFTWIDPLGLKENEIIRYMGESETVSSKAANGGKGGLVPNIRGEKAVWVNQDSNP
GFNPGNEKYRVVATVNNEGVSMLNNHKDISTVDYKETGLKDGVLSKTNEPKARGIGFRML
DKFNKTITSFRVEKKGPNGKWKTCG
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgctctgggcggcccgcctgggcgatgcactcaaccacacctcgatgatg
gccgacatccttggcggcgtgctggaggtggcggcgaatatcgcgatcaccgccgtggcc
accgctgccgtcgtagccgccactggcatcactgtcgtcaccggcggcttgggctgcgtc
gtgcttggcctggtggtcggcaccattgtcggcctggccatgagcaagaccggagccgac
aaaggtttaagtaatttatgcgagggcatcggcaacgccctctttccgcccacggtgcag
gccaacattctcaccggctccaccaacaccctcaccaacaacatccccgcggcccgcgcc
gccggggcgattgaatcccatgtcgccccggccggcaccgagcttgaggcacccgagccg
gaagccgagcccagctacctggacatggccgaaaacttcttctcgcagatgtggcgcccc
accgtcgccacgcctgcccccggcgccgtgcccaagccgctggacatgatcgtctgcatg
aaacacccgccgatgccgccgcagttcctggctgaaggctcggacaaggtcaccatcaac
ggccagcccgccgtgcgcagcggcgaccgtagcacctgcgatgcgacggtggtatcggcc
ggactgatctccccaaacgtgatcatcggcggcggttcggtggtggtgcgcgagatccgc
agcggcaagaccccaggcgtgggcctggcggtcaccgcgctgctgatgctcaagggtggc
aagggcaaattcttcagcaagctgccgtgcatgctggtcggcggcgcggtgtccatggct
gccagcagtgccgcgaacgccgcggccaacgcggcgctgggatcgtcgaacccggtgcac
gccgccaccggcgccaaggtgctgggcggcaatgaagaactggacttcgtcttgccgggc
ttgctgcccatcgattggcaacgcgtctacaacagccgcgacgaacgccgcgacagcttg
ttcggggctggctggagcgtggcctacgaagtccaggtgcaaatcctgccccatcccgag
ggcggcgaaacgctggtgtacaccgatgaacagggccggcccatcgatatggggtcgatc
cccttgggcggtgcggtgttcagtgccggtgaaggcctggccgtgcgccgccacgtcaac
ggacagttgctgatcgaaagcgacgacggcctgtaccgtttgttcgagcccacgccggcc
aacccctcgcatttgcgcctgggccaactgggtgaccgcaacgacaaccgcatctacctc
gactacgacgaggccggacgcttggtgcggctgcgcgataccttcgatctggtgcaagtc
gagttggtccgcgagcacgaccacgtcagccagatcgaacgcctctacccggaccaaccg
cgcgaagtgctggtcagttatgcctacgactccgccggcaatctcgccgaagtacgcgac
gccagcggccaggtgcaacggcgcttcagctacgacgccgggcggcgcatggtcgaacac
caattgcccaccggcctgcgctgcttttatgactgggccttgatcgaggatcaggaatgg
cgcgtggttcgccactggaccgacgagggcgacgcctaccagttcgactacgacctcaag
gccggcaccacgcgtatcaccgacagcctgcaacgcgtcagcacacggcagtggaaccac
cagcaccagatcacccaatacactgacaacgtcggccagacctggctgttcgagtggaat
gacgaacgccagttgctcaacgccaccgacccacagggcggacgctacgcctacagctac
gacgaagccggcaacctgatcagcgaaaccgaccccctgggccgcagcgattccaccctc
tggctcgagcattggtccttaccgctggtggacactgacgccgtcggcaatagctggaag
taccgctacgatcaacgcggcaactgcatcgccgagaccgacccgctgggccacgtcacc
cgctaccgctacgacgcccacggccaggtcatcgaaatcatcgacgccaccggcaaaagc
aagcagctgcgctggaacccgttcgggcaattggtggagcacgtcgattgctcgggttac
ccgacccggttcagctatgacccgcgcggctacctgcaaaccatcaccgacgccctcggc
gagcgcacccagttcagctacgacgcccaaggccggctgctcagcagccagttgccggac
ggtcgcacagagcagtaccagcgcgacgtcgccggccagttgatcggctacaccgacccg
gccggacataccacccgttaccagcacaaccgccgcggccaggtccgccaacgcaccgac
gcccagggccggcaggtgcagttcgcctacgacagcttcggccggctgcaggcgctgacc
aacgagaatggcgagagttatcggtttgcctgggatgccggggatcggttggccgaacag
cgcaaccttgatggcagcgccaagggctacacatacgacgccctcaacaacgtaaaacga
gtcgaaaccgtcgccgcgccgcgaggtgattatcagcccagtgaaaagccccttgttcat
cagttagaacgtgatgccatcggccggctgacaacccgaatcacccctgatggacagtct
cggtacagctatagcccgttgaatcagctaatcgaagccacggtcatcgataacgacggc
aacgaacaacgactgggctttgcctatgacgctctgggttatctgattgaggagcagagt
tcagcaggtgttctgaagcatcactacgatgaactcggcaacttgatccagacccaccta
cccgatggccgttgggtcaaccgtctgtactacggcagtggtcatctgcaccaaatcaac
ctcgatggacaggtcatcagcgacttcgaacgcgataggctgcatcgagaggtactgcgc
acccaaggccaaatcagcacacggagtgagtatgaccgtagcgggcgcttacgcagccgc
caacgtcggcataccagccaaccagcgttgatcccggcagccgatcagacccatttcgag
tttgatcttggtgaccacctggtggggcgccttgagcggctgccaaaaggtcaacaacgc
caattgctgcactacgatgtgacgggccggatcctggcaagtcagagcactcgacaaggc
cagaatgaaacattttccttcgatgccgccgccaatctcctcgacagttcaccgggtaca
ggtgggcgggttacgcacaaccaactcaagcgctatcagaacaagcactatcgctacgat
ggctttggccgaatgattgaaaagcgcagcagccggcatggcctgcagcgtttcagctac
gactcggatcatcggttggttgaagttcgaacacacaaatccgacggtgaaagcatcgtc
aggatgcgctatgacccgttgggtcgaaggatcgagaaaaccgaacacgatgacaacgga
cgtctcatcacctgcacgcgtttcgactgggatggcctgcaattactcaaggaacataaa
aatagcctgaccagcctgtacctttacatcggcgacagtcacgagcccttggcccgcgtc
gacggcatcgatgaacatcaacgcatccgctattaccacaacgaccccaatggtttgcca
caagccttgacggaaagtgacggccatccgctatggcacgctctctaccatgtatggggc
aacaccgccgatgaagtccgtgaaccgtactacatcgaagaacagaacctgcggtttcag
gggcagtacctggaccgggaaacgggcctgcactacagcaccttccgcttctatgatccc
gacataggccgctttaccacgcccgacccgttgggcctggccgcaagcctgaatctttat
cgctacgcaccgaatccatttacctggatcgacccgctggggctcaaagagaatgagatt
atccggtacatgggcgagagcgaaaccgtctcgtccaaggctgccaacggaggcaaaggt
ggcctggttccgaatatccgaggagagaaagcggtctgggtcaaccaggacagtaacccg
ggattcaacccaggcaatgaaaagtatcgggtagtggccaccgtcaataacgaaggtgtg
agcatgctaaacaatcacaaggacatctcaaccgttgactataaagagacgggcctgaaa
gatggtgtgctgtccaagacgaatgagcccaaggccagaggcatcggtttccgaatgttg
gataaattcaataaaaccattacgtcatttcgtgtcgagaagaaaggcccgaacggaaaa
tggaagacctgcggataa
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