Pseudomonas brassicacearum DF41: CD58_09665
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Entry
CD58_09665 CDS
T03174
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
CD58_09665
Enzymes [BR:
pbc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CD58_09665
Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CD58_09665
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
AHL33151
LinkDB
All DBs
Position
complement(2139240..2141168)
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AA seq
642 aa
AA seq
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MRSRLFSVLSCLFVCATAFQTAQAVDISTQRQYYDEAKRALAKGDSGPYFRYSQALRDYP
LEPYLAYDELTARLKSASNAEIEKFLAEHGDLPQANWMKLRWLRWLTERGDWETFVKYYD
PKLNFTELDCLNAQYQLSHGLKAEGYANTEKLWLTGKSQPTACDALFGLWASQGQLTEQK
RWERAKLAAQARNYPLANSLVSGLTSLAPRGQLLVDVAQKPELLNQPSRFTPADEPMSDI
VSLGLRRLARQDPEKAMALLDGYASTMHFSRDEKVAIAREIGLTLAKRFDSRALDVMTKY
DPELRDDTVSEWRLRLLLRLARWDDAYQLTRRLPETLASTNRWRYWQARTLELAQPQNPE
ALTLYKHLARERDFYGFLAADRSQSPYSLVNKPLVMSQALVNKVRNTPGVRRALEFHARG
DIVDGRREWYHVSRHFSRDEMVAQAKLAYDLKWYFPAIRTISQAKYWDDLDIRFPMAHRD
TLVREAKIRGLHPSWAFAITRQESAFMDDARSGVGAAGLMQLMPGTAKETARKFSIPLAS
PQQVLNPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLRGADHLSFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgcctttttagtgtcttgtcttgtcttttcgtgtgtgccactgcctttcaa
accgctcaggcggtggatatttccacccagcgtcagtattacgatgaggccaagcgcgcc
ttggccaagggtgattccggtccctattttcgctacagccaggcccttcgcgattatccg
ctggagccgtacctcgcttatgacgaactgaccgctcgcctcaagagcgccagtaacgcc
gaaatcgagaaattcctcgccgaacacggtgatctgccccaggccaactggatgaaactg
cgctggctgcgttggctgaccgagcgcggcgactgggaaaccttcgtcaagtattacgac
cccaagctcaatttcaccgaactggactgcctcaacgcccaatatcagctcagccacggc
ctcaaggccgagggttacgccaacaccgagaaactctggcttaccggcaagtcccagccg
acagcgtgtgacgcactgtttggcctatgggcttcccagggtcagttgaccgaacagaag
cgctgggagcgcgccaagttggctgcccaggcacgcaattacccgctggccaacagcctg
gtcagcggcctgacctccctcgcccctcgtggccaattgctggtggacgtggcgcaaaag
cccgaactgctcaaccaaccctcgcgcttcaccccggccgatgaaccgatgtccgatatc
gtcagcctcggcctgcgccggctggcccgccaagacccggaaaaagccatggcgctgctg
gacggctacgccagcaccatgcatttttcccgggatgaaaaagtcgcgattgcccgggaa
atcggcctgaccctggccaagcgcttcgacagccgcgcgctcgacgtcatgaccaaatac
gacccggaactgcgggacgacaccgtttcggaatggcgcttgcgcctactgctgcgcctg
gctcgttgggacgacgcctaccagctgacccgccgcctgcccgagacgctggccagcacc
aaccgctggcgctactggcaggcccgtacgctcgagctggcacagccgcagaaccccgag
gcgctgacgctctacaagcatctggcccgtgagcgagacttctatggcttcctcgccgcc
gaccgctcccagtcgccgtactcgctggtcaacaagccgctggtgatgagccaggcgctg
gtcaacaaggtgcgcaacacccccggcgtgcgtcgggccctggagtttcacgcccgcggc
gacattgtcgacggacgccgcgagtggtatcacgtcagccggcatttcagtcgggacgag
atggtcgcccaggcgaaactggcctacgacctgaagtggtatttcccggcgatccgtacc
atcagccaggccaagtactgggacgacttggacatccgtttcccaatggcccaccgcgac
accctggtgcgcgaagccaagatccgcggcttgcatccaagttgggcgttcgccatcacc
cgccaggaaagtgccttcatggatgatgcccgctctggcgtcggtgccgccggcctgatg
caattgatgccaggcactgccaaggaaaccgcgcgcaagttcagcattcccctggcctcg
ccgcagcaagtgttgaacccggacaagaacatccagctcggcgcggcctacctgagccag
gtccacagccagttcaacggcaaccgcgtcctggcctccgccgcctacaacgccggcccc
ggtcgcgtgcgccagtggctgcgcggcgccgaccacttgagcttcgacgtctgggtcgag
agcattcccttcgacgaaacccgccaatacgtgcagaacgtattgtcatattcggtgatc
tacggccagaaactcaactcgccgcagccgttggtggactggcatgagcggtatttcgat
gatcagtga
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