Pseudomonas brassicacearum DF41: CD58_09690
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Entry
CD58_09690 CDS
T03174
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00071
Fatty acid degradation
pbc00280
Valine, leucine and isoleucine degradation
pbc00310
Lysine degradation
pbc00362
Benzoate degradation
pbc00380
Tryptophan metabolism
pbc00410
beta-Alanine metabolism
pbc00640
Propanoate metabolism
pbc00650
Butanoate metabolism
pbc00907
Pinene, camphor and geraniol degradation
pbc00930
Caprolactam degradation
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01200
Carbon metabolism
pbc01212
Fatty acid metabolism
Module
pbc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CD58_09690 (fadB)
00650 Butanoate metabolism
CD58_09690 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CD58_09690 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CD58_09690 (fadB)
00310 Lysine degradation
CD58_09690 (fadB)
00380 Tryptophan metabolism
CD58_09690 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CD58_09690 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CD58_09690 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CD58_09690 (fadB)
00930 Caprolactam degradation
CD58_09690 (fadB)
Enzymes [BR:
pbc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CD58_09690 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CD58_09690 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CD58_09690 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CD58_09690 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AHL33155
LinkDB
All DBs
Position
2144898..2147045
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTVAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLQEAALEMIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKVYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIIYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtggacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtcttcatcgtcggcgccgatatcaccgaattcgtcgataacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagccaaccgtattttcagcgacttcgaa
gacctcaacgtaccgaccgtcgcggccatcaacggtatcgccctgggcggcggcctggaa
atgtgcctggccgcggactaccgcgtcatgtccaccgtcgccaagatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgctggcaaggaaaaccgtgctgaagacgccctg
aaagtcggcgcggtggatgccgtggtcgagcctggcaaactccaggaagcggcccttgaa
atgatcaaacgcgccatcagcggcgagtttgactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgcgatcgagcaaatgatggccttcgagaccgccaagggtttc
gtcgccggtcaggcaggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggccctggaagtcgaggccgcaggcttcgtcaag
ctggccaagacctcggctgcgcaaagcctgatcggtctgttcctcaatgaccaggagctg
aagaaaaaggccaaggtctacgacgaaatcgcccgtgacgtgaagcaggccgcggtactc
ggtgccggcatcatgggtggcggtatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggtatcgagcaaggcctggccgaagcggccaagctg
ctggtcggccgcgttgataaaggtcgcatgactgcggcgaagatggccgaagtgctcaac
ggcattcgtccaaccctgtcctacggcgattttggccatgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtactggctgaagtcgaagacaaggttaaa
gaggacactatcctcgcctcgaacacctcgaccatttccatttcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccggggtgagaagtccagcgaactggccgtagccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaatgactgcccgggctttttggtc
aaccgcgtgctgttcccttacttcggcggtttcgccaagttggtcagcgctggcgtggat
ttcgtgcgcatcgacaagatcatggagaaattcggctggcccatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggctgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggctatcgatgtgctctacgaagccaagcgc
ctgggtcagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagcaa
aagaaagtcgccgattcgtcggtgctggaagtgctcaagccgatcatctacgagcagcgt
gaagtcaccgacgaagacattatcaactggatgatgatcccgctgtgcctcgagaccgtt
cgttgcctggaagacggcattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgttacatcgattcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgctgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgagatggccaagaacggccagcgtttcttcggttaa
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