KEGG   Pseudomonas brassicacearum DF41: CD58_10130
Entry
CD58_10130        CDS       T03174                                 
Name
(GenBank) peptigoglycan-binding protein LysM
  KO
K08086  pilus assembly protein FimV
Organism
pbc  Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbc02044]
    CD58_10130
Secretion system [BR:pbc02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   CD58_10130
SSDB
Motif
Pfam: TPR_19 TPR_14 ATG16 LysM Alkyl_sulf_dimr Cytochrom_B562 DUF6584 Cortex-I_coil TPR_16 TPR_4 TPR_6 ATG14
Other DBs
NCBI-ProteinID: AHL33235
LinkDB
Position
2235961..2238561
AA seq 866 aa
MVQVRKLVLAIAAASALSSGMAQALGLGELTLKSPPNQPLVAEIELLDVQQLTAAEVVPS
LASPDDFAKAGVDRKAFLNDLAFTPVINANGKSVLRVTSSQPLSEPMVKFLVQVMWPNGR
LLRDYSVLLDPSKFSPQAAEAARAKPAQVVSTPVTGATKPSQYTTTPRDTLWEIAAKVRN
GGSVQQTMLAIQALNPKAFINGNINLLKTGQVLRLPDPVQSTALPQPQAIAEVAAQNAAW
RQGRPGVARNGQQQLDATKRGRGEGAPAQAAGRDNLSLVSAESAKAGGKGKGAAGDAQAL
SNKLAVTQESLDSARRDNEELKSRMADLQSQLDKLQRLIELKNNQLAKMQADGSAVPPAG
EAPPAMSAELTPGPAAQTPAAAPTPAPEASPEASSEATPPAAPVEPTPAASDTQKYNDLL
TNPILLGLIGGGALVLLLLLLLLARRRKAQQEAEKHLRMARALEEEADFSPELDLPPSSF
EGIDVPPPSVKLEPTPAPKPMPKPAPLVAPVIVTPPIAAPLVAPAAERSDDVLPQAQSHI
DRGRLNQAADLLEQGIKAEPQRSDLRLKLMEVYGQQGDRDAFVAQERQLVANGENYAQVE
QLKSRFPAMVVAATAGLAAAAVAAELDAQYVKDLLEDKAPTDEELDSAFDLSLDDMEATP
VAPAPEPVAELDAFPEDDDLSFESVLKQQTEANESLDDLSEFDLDLGADAPAPALDDEDF
LLDLDDDLKGLDLPEADTPALADTPADDLELPADFDLSLADEMDAQDKPKDAFESELDDV
NAELDRLSDDLSLPTFTADDALVGAEDEPDFDFLSGTDEVATKLDLAQAYIDMGDSDGAR
DILGEVLSEGDATQKSEAQEMLARLV
NT seq 2601 nt   +upstreamnt  +downstreamnt
atggttcaagttcgcaaactggtgttagcaatagcggccgcctcggcgctgtcctccggt
atggcgcaagcgctcgggctcggggaattgaccctcaagtcgccgccgaaccagcctctg
gtcgccgagatcgagttgctcgatgtccagcagttgactgccgccgaagtcgtaccgagc
ctggcctcgcccgatgacttcgccaaggctggggtcgaccgcaaggccttcctcaacgac
ctggccttcaccccggtgatcaacgccaatggcaaaagcgtcctgcgggtgacctccagc
cagccgctgtctgagccgatggtcaaattcctggtgcaggtgatgtggcccaatggccgc
ctgttgcgcgactacagcgtgttgctcgatccgtccaaattctcgccgcaggctgctgag
gcagcgcgggcgaagccggcccaggttgtgtctacaccggttaccggggccaccaagcct
tcccagtacaccaccacgccgcgcgataccctgtgggaaatcgcggccaaggtgcgcaac
ggtgggtcggtccagcaaaccatgctggcgatccaggcgttgaaccccaaagcttttatc
aatggcaatatcaacctgctcaagaccggccaggtgctgcgcctgccagaccctgtgcaa
agcaccgcgctgccgcaaccccaggccatcgccgaagtggctgcgcagaatgccgcctgg
cgccaggggcgtccgggcgtggcgcgcaacgggcagcagcagttggacgcgaccaagcgt
ggtcgcggtgaaggtgcgccggcgcaagccgccggtcgcgataatttgagcctggtgtcg
gccgaatctgcgaaagcgggtggcaagggcaaaggcgctgccggggacgcccaggccctg
agcaataagctcgcggtcacccaggaaagcctcgactcggctcgccgggacaacgaagaa
ctgaaaagccgcatggccgatctgcaaagtcagctggacaagctgcagcgcctgatcgag
ctgaagaacaatcaactggccaagatgcaggccgacggcagcgctgtcccgcctgccggt
gaagcacccccggcgatgtccgcagaattgacgcctgggccagcggcacaaaccccggcg
gcggctccaacccctgcgcctgaggcgtctcctgaggcgtcctctgaggcgacgccgcct
gctgcaccggtcgagccgacacctgctgcttccgacacgcaaaagtacaacgacctgctg
accaacccgatcctgttgggattgattggcggcggcgcactggtcctgctgttgctgctg
ttgttgctcgcccgccgtcgcaaggcccagcaagaagccgagaaacacttgcgcatggcc
cgagccctcgaggaggaggccgacttctccccggagctcgatctgcccccgagcagcttc
gagggcattgatgttccaccgccaagcgtaaagctcgagccaacaccggcccctaaaccc
atgcccaagccggccccgttggtcgcgccggtgatcgtcacgccgcctatcgcggcgcca
ttggtggcgccggccgccgagcgctccgacgatgtgctgccccaggcccagtcccatatc
gaccgcggtcgcttgaaccaggcggcggacctgcttgaacaaggcatcaaggctgagcct
cagcgcagcgacttgcgcctcaagctgatggaagtctacggccagcagggcgaccgcgac
gctttcgtcgcccaggaacgtcaactggtggccaatggcgaaaactacgcccaggtcgaa
cagctcaaaagccgtttcccggccatggtggtcgccgccaccgccgggctggccgctgcg
gccgtggccgcggaactggatgcgcagtacgtcaaggacctgctggaagacaaggcgccg
accgatgaggagttggacagcgccttcgacctgagcctggatgacatggaggccacgccc
gtcgcgccagcccccgagcctgtcgccgagctggacgcgttcccggaagacgacgacctg
agtttcgagtcggtgctcaagcagcagaccgaagccaacgaaagcctggacgacctgtcg
gagtttgacctggacctgggcgccgatgccccggcgccggctctcgatgacgaagacttc
ctgctggacctggacgacgacctcaagggcctggacttgccggaggccgatacgccagcc
ttggctgacactcctgccgacgacctcgaactgccggcggatttcgatctgtccctggcc
gatgaaatggatgcccaggacaagccaaaggatgctttcgagtccgagctggatgacgtc
aacgcggagctggatcgcctgtctgacgacctgagcctgccgaccttcacggctgatgac
gccctggtcggcgcagaagacgaaccggacttcgacttcctcagcggcaccgatgaagtg
gcgaccaagctcgatctggcccaggcctacatcgacatgggcgacagcgacggcgcccgg
gatatcctcggcgaagtcctcagcgaaggcgacgcgacgcagaagagcgaagcgcaggaa
atgttggcgcgcctggtctga

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