Pseudomonas brassicacearum DF41: CD58_10350
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Entry
CD58_10350 CDS
T03174
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_10350
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CD58_10350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
HTH_20
nSTAND6
AAA
HTH_7
AAA_2
HTH_23
HTH_22
Mg_chelatase
AAA_3
HTH_11
HTH_AsnC-type
HTH_24
HTH_28
HTH_10
PAS
AAA_7
HTH_36
HTH_Tnp_1
HTH_1
nSTAND3
HTH_psq
PAS_7
Phage_CI_repr
Motif
Other DBs
NCBI-ProteinID:
AHL33267
LinkDB
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Position
complement(2268352..2270199)
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AA seq
615 aa
AA seq
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MAAPAPALSHDAIIQASWSRCRAFGLSHQSVPAFDQLPAEGIAQLLESQHSLVQTTHQEV
LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLAHGFSAGASWMERCSGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFRGEHFQLTFNTGLNNLDSQWAGLLIFDESGQVLSANRRADNLLGLS
LSRVSIESLFKVSLLELLNQPDGLPFALQASGSNRFQCLLRRPNQVSIKARVFTEPAPSP
VPGNASTISLNTLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSR
CKQPFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADRGTLFLDEIGDMPL
PTQARLLRVLQERCVQPVGSAELFPVDIRIISATNRSLREQVQLGRFREDLYYRIGGLTL
ELPPLRERSDKQALFKRLWEHHREPTQWAGLSREVLDLFERHPWPGNLRQVSSVLQVALA
MAEEQPIRPEHLPDDFFVDLEMDPVETPEPLTVDLNDVEDLNRQLQAVGGNISHLARRLG
VSRNTLYKRLRQLEN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacctgcccccgccttgtcccacgacgctatcatccaggcttcctggtcccgt
tgccgcgcctttggcctgagccatcagagcgtgcccgccttcgatcaactgcccgccgaa
ggcatcgcccagctcttggagagccagcattcgctggtgcagaccacccaccaggaagtc
ctgccttattacgagaacatcctgagcaactccaattgcctgatcatgctggccgacaat
cagggccaggtgctgacctcctggggaacccagcgcttcatcgagccgaaactggcccat
gggttcagcgccggggcgagctggatggagcgctgcagcggcaccaacgccatcggcacc
gcactggcctgtgaacaggcggtgcacattgaacatgatgagcattttctcaaggccaac
cgcttcatgaccggctccgccgcgccgatcttcgacgccgagcgcaaggtcatcgcggtg
ctggatgtttccagcgacagctacctgccgccctcccacactctgggcatggtcaagatg
atgagccagaccgtggagaaccggctgatcctcaatctgtttcgcggtgaacacttccag
ctgaccttcaacaccggattgaacaacctcgacagccaatgggctgggctgctgatcttc
gatgagagcggccaggtactttccgccaatcgccgggccgacaacctgctgggcctgagc
ctgtcgcgggtcagcatcgaaagcctgttcaaggtttcgctgctggaattgctgaaccaa
cccgacggcctgccattcgccctgcaagcgtccggcagcaaccgtttccagtgcttgctc
cggcgcccgaaccaagtgtcgatcaaggctcgcgtcttcaccgaacccgcgccgtcgcca
gtgcctggcaacgcctccaccatcagtctcaacaccctgcacttcggtgacagccgggtg
gaaaaagccgtgcgccaggccgagcgtttgctggaaaaggacattccgctgctgatccac
ggcgagaccggtgtcggcaaggaagtgttcgtcaaagccctgcaccaggccagttcccgc
tgcaagcagccgttcattgcggtcaactgcgcggcgatccccgccgagctggtggagtcg
gagttgttcggttacgaaaaaggcgccttcaccggcgccaatcagaagggcagcatcggc
ctgatccgcaaggccgaccgcggcacgctgttcctcgatgagatcggcgacatgcccctg
ccgacccaggcccggctgctgcgggtcttgcaggagcgttgcgtgcaaccggtgggcagc
gccgagctgttcccggtggacatccgcatcatttccgccactaaccgctcgctgcgcgaa
caggtgcaactggggcggtttcgcgaagacctgtactaccgcatcggcggcctgaccctg
gaactgccaccgctgcgcgaacgcagcgacaaacaggccctgttcaaacgcctctgggaa
caccatcgcgaaccgacccaatgggccggcctgagccgtgaggtgctggacctgttcgaa
cgccatccgtggccgggcaacctgcggcaggtcagcagcgtgctgcaagtggccctggcg
atggccgaggaacagccgatccgcccggagcacctgcccgacgacttctttgtcgacctg
gaaatggaccccgtggaaacgcccgaaccgctgacggtggacctgaacgatgtcgaggat
ctgaaccgccagttgcaggcggtgggcggcaacatatcgcacctggcgcgacggctgggg
gtcagccgcaataccttgtacaaacgcctgcggcaactcgaaaactga
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